Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1908 ATGGAAAAAAAAAAAAATCTGTTCATTCTGGTGCTCGGAGAAGACCTTGAAACTGTTGAAACCATGAACGTAGAGGAAGAGGTTGAGCGACTCAAACAAGAAATCAAGAGGCTTGGCCAAGCCCAACCAGATGGCTCTTACAAGGTCACATTTGGCGCACTGTTTAATGATGACCAATGTGCAAATATATTTGAGGCACTTGTGGGGACGCTAAGAGCAGCGAAGAAGAGGAAAGTAGTGACATATGATGGCGAGCTTCTGCTTCAAGGAGTCCATGATAATGTGGAAATCACGCTCAAGCCAACTGAAGAACCTGTGAAGAGTTAA 327 0.4373 MEKKKNLFILVLGEDLETVETMNVEEEVERLKQEIKRLGQAQPDGSYKVTFGALFNDDQCANIFEALVGTLRAAKKRKVVTYDGELLLQGVHDNVEITLKPTEEPVKS 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1908 108 Pfam Costars 23 99 IPR027817 -
Lele16g1908 108 Gene3D Costar domain 22 107 IPR038095 -
Lele16g1908 108 SMART Costars_2 22 100 IPR027817 -
Lele16g1908 108 FunFam costars family protein ABRACL 22 102 - -
Lele16g1908 108 Coils Coil 21 41 - -
Lele16g1908 108 PANTHER COSTARS FAMILY PROTEIN ABRACL 22 103 IPR044302 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1908 Lele-ChrLele16 11505983 11508813 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g0606 13 18227245 18230488 Lele16g1908 16 11505983 11508813 hybridization
Lele14g0504 14 16676205 16679776 Lele16g1908 16 11505983 11508813 hybridization