Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1902 ATGGCCGGAGCCTCGTCTGATCGGAACAGTCACGTGGCAGTCTTCGCCTTCCCTTACGGCACCCATGCCGCTCCTCTGCTCAACCTCGTCGTCAAGCTAGCACGTGAGGCTCCGCACGTGACCTTCTCCTTCTTCACCACCCAACAGAGCAAGCATTCCCTCTTATCCTCCAAATTCAGCAACACCATCCCACAAAGCATCAAGTTCTTCGCCGTCTCCGACGGCATCCCCGACGGACTCGACCTCACCCACCACCACCCATCACGGCGGCTGGACTTCTTCCTCGAAGCTGGTCCTCAGAACCTGAAACAGGGTCTAACAATGGCAGTTTCAGAGAATAATCTGAAAGTGACATGGGTGATTTCTGATGCGTTCGTTACTTCTTCTCTTGCTCTTGCTCAAGAGTACGGTGTTCCATGGATTGCTCTCTGGACTTCGTATACTTGTTCTCTCTCTGCTCACTTCTACACACAATTGATCCGCGAAAAGTTTCGTGGCGATGATGAAGATGGAAGCTTGCCCTTCATTAATCCTTGCTTCTCCAAGTTTCTAACCCAGGATTTACCAGAAACTATTATACTCAAAGATGAAGAAGATGAAAAACAAGAATCTGCGTTTTCCAGAATGCTAGCTTCAATGGGGAGGGTGCTTCCAGAAGCCGAAGCAGTGGTGGTTAACTTCTACGAGGAAGTAGACCCGCCTGAAATGGTTCAGGATCTGAGATCCAGGATGAAGACTCTTATCTACGCAGGTTTTCTGAATCTATCCCTCCCACTTCCGCCGTCGCCGCCGGCGAACACTGACCAAACCGGAAGCTTGCGGTGGCTAGACCAGCAGAGTGCAAAGTCATTAGTATATATCAGCTTAGGAACAGTGGTTTCACCTCCTCCTTACGAGCTCGCCGCCATTGCAGAAGCACTCGAAGAACTCGAAGATGTGCCATTCCTCTGGTCGCTTAAAGAAGAATCAAAGGCATTGCTTCCAAAAGGGTTTCTGGAAAGAACAAGCATGAAAAAGGGGAAGGTAGTTCCATGGGCTCCACAAACCCTAGTTTTAGCTCATGAATCAGTTGGAGTTTTCGTGACTCACGGTGGGTGTAACTCAGTGAGCGAGTCACTGTCGAGTGGTGTCCCCATGATTTGCAGGCCTTATTTCGGAGATCAGCTTATGGCGGCGAGGATGGTGGAGGATGTTTGGGAGGTTGGGGTGAAGATAGAAGGTGGGTTGTTCACGAAGGAGGCGTTGATCATGAGCTTGAAGGTTGTTCTGCAGCAGGAAGAAGGGAAGGCGATGAGACGGAAGGCTGAGAAATTGAAGAACATTGTGATTGAAGCTGCGGGGCAAAATGGGAAAACTGGAAAAGAATTTAAAACATTGGTTGAAGTAATCTCTTGA 1395 0.4939 MAGASSDRNSHVAVFAFPYGTHAAPLLNLVVKLAREAPHVTFSFFTTQQSKHSLLSSKFSNTIPQSIKFFAVSDGIPDGLDLTHHHPSRRLDFFLEAGPQNLKQGLTMAVSENNLKVTWVISDAFVTSSLALAQEYGVPWIALWTSYTCSLSAHFYTQLIREKFRGDDEDGSLPFINPCFSKFLTQDLPETIILKDEEDEKQESAFSRMLASMGRVLPEAEAVVVNFYEEVDPPEMVQDLRSRMKTLIYAGFLNLSLPLPPSPPANTDQTGSLRWLDQQSAKSLVYISLGTVVSPPPYELAAIAEALEELEDVPFLWSLKEESKALLPKGFLERTSMKKGKVVPWAPQTLVLAHESVGVFVTHGGCNSVSESLSSGVPMICRPYFGDQLMAARMVEDVWEVGVKIEGGLFTKEALIMSLKVVLQQEEGKAMRRKAEKLKNIVIEAAGQNGKTGKEFKTLVEVIS 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1902 464 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 10 462 - -
Lele16g1902 464 Gene3D Glycogen Phosphorylase B; 11 450 - -
Lele16g1902 464 PANTHER GLYCOSYLTRANSFERASE 11 460 - -
Lele16g1902 464 CDD GT1_Gtf-like 11 439 IPR002213 GO:0008194
Lele16g1902 464 ProSitePatterns UDP-glycosyltransferases signature. 345 388 IPR035595 -
Lele16g1902 464 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 276 427 IPR002213 GO:0008194
Lele16g1902 464 FunFam Glycosyltransferase 267 444 - -
Lele16g1902 464 Gene3D Glycogen Phosphorylase B; 267 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1902 Lele-ChrLele16 11473096 11474571 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1902 8 463 Glycosyltransferase AT5G17050 44.469 2.34e-125 370
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele16g1904 16 11480703 11483657 Lele16g1902 16 11473096 11474571 CCT
Lele14g0508 14 16714217 16715683 Lele16g1902 16 11473096 11474571 hybridization