Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1871 ATGGGACGTAACCCTATCATTTTCTCAACCTCACTTCTTCTCCTCATCGTCTTAGCCATCACGCATGTCTCCGATGCTCAAGACTCGCCCCAAGACTTCGTCAACGCTCAGAACGCCGCCCGTGATCAAGTCCGCGTCAGACACATATCATGGGATGATAGGGTGGCCTCCTTCGCTCGCAACTACCTGAGCCAGTTTAGAGACAGCTGCCAGATGGTTCACTCCGGCGGCCCCTATGGTGAGAACCTCGCCTGGGGCTATCCTGACCTCACCGGCACCGCCGCCGTCAAGATGTGGGTCGATGAGAAGAAATTTTACGATTATAACTCAAACTCGTGCGTTGGAGGAGAGTGCCGACACTACACTCAGGTGGTTTGGCGGGACTCGGTTCGACTCGGTTGTGCGAAAACTCACCTGGAGACTTTGTCAACGCCCACAACGCCGCCGTCAGGCAAATTGGCATCGGACACTTTCATGGGACGAAAAGGTGGCCTCCTACGCTCGCAACTACTTGAACCGGTTGAGAAGCAGCTGCCAGATGGTTCGCTCAGGCGGCCCCTACAGCGAGAACCTCGCTGCCGTCAAGATGCACTACACTCAGGTGGTTTGGCGTACTCGGTTCGACTCGGTTGTGCGAAGGTGAAGGGCAACAACAATCGTGGGTGGGACTCTGATCAGCTCATTTGCAAAATGAATCCTGTTTCAGTTTCTTTCAGTTTTCTCCTCCAAATCTTCGTGTGGTTATTATTATTGGCCTGTCTCTTTATAACAACAACATGCCATGGTTCTGAGAGTGATTATGAAACCCATTGCTTGAAATCCGTCAAACAATCACTTGATCCATTCAATCAGTTATCTGACTGGGATTTCAACACAAATTCCAAAGACTCCAACTTTTGTGGATTCTCTGGTGTTCAATGCTTCGACATCGACGAACAGAGAGTAGTATCAAGTCTCAATCTTTCTAACATGGGACTAAAGGGACCATTCCCTAAAGGTATTGAAAATTGTTCATCACTGCAAATTCTTGACCTTTCCAAAAACGATATTTCAGGTGAGATTCCTAAAGTTGTTGCCAACTTATATTCACTGGTCAACCTTAAACTTGATGACAACCAGCTATCTGGTGAAATCCCTCATGAAATTGGGTTGCTTCCTCAAATGGAATCTTTTAATGTTGCCAACAATTTTTTGTCAGGGGAAGTTCCTGTCTTTACCAGAAGTGCTCATTTTATGTTGAGCTATGCCAATAATAGTGGGCTTTGCGGGTATTCTGTAGATCTAGAACCCTGTGATGATGACAAATCTTCTGATAGATCATTCTGGTACAGTTTTGCAATTGCTTACGTTTGTTCTGCAACCTCAGTCATAGTTTCTTTCATGTACTATTGCCAACCTTGGAGAGTACTCTTGAAGAAAAGGAGGAGAAATGCTGTGTCTTCTTCTAGAAGAAAGAGACAGAACATTATTCAAACTCGTACTACACAAGTTGCTGAGTTGCTTCCCTTTGCATTGCAAGAGCAAGGAATCAAAGAGCTCTCAGCAATGTTGGAGAGGCTGATTTCAAGAATAAACTTTGGGGAACTATGTGAGGCAACTAATTACTTCAGCACAGACAATGTCTTAGGATTTGGAAGAACAGGGATCGTGTACAAGGCCAAGCTACCAAATAACAACTATTTCATGGCGGTTAAAAGACTCTATGATTCTCAACTGTACAAGACAGAGTTCTTACTAGAAACTATGGTCCCAGGAAAACACAGACACCACAACATAGTCCCTCTTGTCGGATTCTGTCTGAACAAAAACGAAAGGCTTCTGGTTTATGAATACATGTCAAATGGAAAACTCCAAGATTGGCTACAATCTGAATCTGATGATGGACCCCAACATCAAGCTATGGTATTATTAGAATGGCCTATTAGGGTTTATATTGCTCTTGGGTTAGCTAGAGGCTTGTCTTGGCTTCACAACAAGTGCAACATTATTCATCTGAATCTGAGTTCTGAGTGTGTTCTTCTCAGCAAAGATTTCGAACCCAAAATTTCAAACTTTGGCAAGGCCAAGTTCATCAATCAGAACATGAACGATCATTTGAGGAAGGGTTCCGTGGAGAAGGATGTTTATGGTTTTGGAGTAATTCTTTTGGAGCTCATAACTGGGAAGAGATTGAATGATCCAACCACGGATTCTTCTTCTTTGATGAAATTAATCAGTAGTTGCGATTTTTATAATGGGATTGATAAGTTTCTGATTGGGAAAGGATTTGATGAGAAAATATTTGGTCTGATTGAAGTTGCAAGTGATTGTGTCAAGCCTTGTTTGGCGCAGAGACCAAAGATGGTTGAAGCATACAGAAGAATCAGAGCTTTGTGGGAGGGCTATGGGCCCATGTCTGCTTCTGCAAGTCTAAAGCTATCTACGGTTTGTCCTATGGAGATAACATGTGAACATGAAATTGAATGCCTTCAATGA 2475 0.438 MGRNPIIFSTSLLLLIVLAITHVSDAQDSPQDFVNAQNAARDQVRVRHISWDDRVASFARNYLSQFRDSCQMVHSGGPYGENLAWGYPDLTGTAAVKMWVDEKKFYDYNSNSCVGGECRHYTQVVWRDSVRLGCAKTHLETLSTPTTPPSGKLASDTFMGRKGGLLRSQLLEPVEKQLPDGSLRRPLQREPRCRQDALHSGGLAYSVRLGCAKVKGNNNRGWDSDQLICKMNPVSVSFSFLLQIFVWLLLLACLFITTTCHGSESDYETHCLKSVKQSLDPFNQLSDWDFNTNSKDSNFCGFSGVQCFDIDEQRVVSSLNLSNMGLKGPFPKGIENCSSLQILDLSKNDISGEIPKVVANLYSLVNLKLDDNQLSGEIPHEIGLLPQMESFNVANNFLSGEVPVFTRSAHFMLSYANNSGLCGYSVDLEPCDDDKSSDRSFWYSFAIAYVCSATSVIVSFMYYCQPWRVLLKKRRRNAVSSSRRKRQNIIQTRTTQVAELLPFALQEQGIKELSAMLERLISRINFGELCEATNYFSTDNVLGFGRTGIVYKAKLPNNNYFMAVKRLYDSQLYKTEFLLETMVPGKHRHHNIVPLVGFCLNKNERLLVYEYMSNGKLQDWLQSESDDGPQHQAMVLLEWPIRVYIALGLARGLSWLHNKCNIIHLNLSSECVLLSKDFEPKISNFGKAKFINQNMNDHLRKGSVEKDVYGFGVILLELITGKRLNDPTTDSSSLMKLISSCDFYNGIDKFLIGKGFDEKIFGLIEVASDCVKPCLAQRPKMVEAYRRIRALWEGYGPMSASASLKLSTVCPMEITCEHEIECLQ 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1871 824 CDD CAP_PR-1 30 136 - -
Lele16g1871 824 SUPERFAMILY L domain-like 282 408 - -
Lele16g1871 824 SUPERFAMILY PR-1-like 25 139 IPR035940 -
Lele16g1871 824 SMART SCP_3 28 155 IPR014044 -
Lele16g1871 824 ProSitePatterns Protein kinases ATP-binding region signature. 542 565 IPR017441 GO:0005524
Lele16g1871 824 Pfam Leucine rich repeat N-terminal domain 266 307 IPR013210 -
Lele16g1871 824 FunFam CAP, cysteine-rich secretory protein, antigen 5 27 144 - -
Lele16g1871 824 Gene3D Phosphorylase Kinase; domain 1 498 611 - -
Lele16g1871 824 Gene3D Ribonuclease Inhibitor 266 426 IPR032675 -
Lele16g1871 824 PANTHER LEUCINE RICH REPEAT KINASE 2 275 403 - -
Lele16g1871 824 Gene3D CAP 28 152 IPR035940 -
Lele16g1871 824 PRINTS Allergen V5/Tpx-1 family signature 49 67 IPR001283 -
Lele16g1871 824 PRINTS Allergen V5/Tpx-1 family signature 118 134 IPR001283 -
Lele16g1871 824 PRINTS Allergen V5/Tpx-1 family signature 95 108 IPR001283 -
Lele16g1871 824 Gene3D Transferase(Phosphotransferase) domain 1 612 796 - -
Lele16g1871 824 ProSitePatterns CRISP family signature 1. 119 129 IPR018244 GO:0005576
Lele16g1871 824 SUPERFAMILY Protein kinase-like (PK-like) 523 789 IPR011009 -
Lele16g1871 824 FunFam Leucine-rich repeat receptor protein kinase EMS1 309 405 - -
Lele16g1871 824 Pfam Protein kinase domain 537 732 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele16g1871 824 Pfam Cysteine-rich secretory protein family 34 135 IPR014044 -
Lele16g1871 824 ProSiteProfiles Protein kinase domain profile. 536 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1871 Lele-ChrLele16 11180379 11188011 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1871 250 796 Receptor kinase-like Gene Family AT3G28450 32.455 6.02e-79 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele16g1871 Pkinase 1.8e-22 CL0016