Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1868 ATGGGTTCTCCGGAGAACCCCAATTGGGTATTCGATTACGGTTATTTAGACGACATTCCCGTCCTTGGCGGTGACCTTCCTTCCCTTGACCCGCCAGAGTTTGCTTGGCCCTCTCATTCCCTCGCTGCTCCTCCTGCTGATTTCAGTGTGGAGTTGGACGATACCTATGGGAATTCTGACGGTCTTAAGGAACCTGGATCAAGAAAACGGCTATTGTCAGGATCTGGCAATTCATCTGGTTCCAAAGCATGCAGAGAGAAATTGAGGAGGGGTCGACTGAATGACAGGCATCTTCGAATCTTCCATCCCCTTTCTATGTTCCTAGAATTGGGTTCTGTCCTTGATCCTGGCAGGCCTACCAAAACAGACAAGGCTGTCATATTAAGCGATGCAGTTCGAGTGCTCTCTCAGCTACGAGAAGAGTCTCAGAAGCTTAGAGAGTCCAACGAGAATCTTCAGAAGAAAATAAATGAATTAAAGGCTGAGAAAAATGAGCTCCGTGATGAGAAGCAGCGACTAAAATCGGAGAAAGATGACATTGAGTGGAAAGTTAAAGCCTTGAATTCACAACCAGGCTTCCTGCCTCATCCGCCCACCCTCGCAGCAGCACCATTTCCAGCACCAGGACAAGTTCTCGGGAGCAAGATGGTGCCATTCATCGGTTACCCAGGAGTTTCAATGTGGCAGTTCTTACCCCCTGCTTCTGTCGACACCTCACAGGACCATGTACTTCGCCCCCCAGTTGCCTAA 750 0.492 MGSPENPNWVFDYGYLDDIPVLGGDLPSLDPPEFAWPSHSLAAPPADFSVELDDTYGNSDGLKEPGSRKRLLSGSGNSSGSKACREKLRRGRLNDRHLRIFHPLSMFLELGSVLDPGRPTKTDKAVILSDAVRVLSQLREESQKLRESNENLQKKINELKAEKNELRDEKQRLKSEKDDIEWKVKALNSQPGFLPHPPTLAAAPFPAPGQVLGSKMVPFIGYPGVSMWQFLPPASVDTSQDHVLRPPVA 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1868 249 CDD bHLH_AtILR3_like 82 167 - -
Lele16g1868 249 PANTHER BHLH TRANSCRIPTION FACTOR 6 249 IPR044818 GO:0003700|GO:0006355|GO:0046983|GO:0055072
Lele16g1868 249 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 77 138 IPR011598 GO:0046983
Lele16g1868 249 MobiDBLite consensus disorder prediction 54 88 - -
Lele16g1868 249 SMART finulus 83 144 IPR011598 GO:0046983
Lele16g1868 249 Coils Coil 128 190 - -
Lele16g1868 249 Gene3D - 81 171 IPR036638 GO:0046983
Lele16g1868 249 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 81 158 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1868 Lele-ChrLele16 11157237 11159660 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1868 1 249 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 53.333 5.11e-87 256