Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1854 ATGTGCAGCTTCGGTGGTAGGATATTACCTCGCCCCCTCGACAACCAGCTCCGGTACGTCGGAGGTGATACCCGAATCGTCGCCGTCCATCGCTCCGTCTCCTTCTCCGCTCTCCTCCTCAGGCTTTCTAAGCTCTCAGGCACTACCAATATAACAGTGAAGTACCAGCTTCCCAATGAGGAGCTGGATGCCTTGATTTCAGTGACGACCGACGAGGATGTGGGGAACATGATGGAGGAGTACGAGCGGGTGGCGCAGAATCAAAATCCGAGGTCGGCTCGGCTCCGGCTATTTCTGTTCGTTAAGGGAGAAGATTCTAGAACTAACAGTATCAGCTCCCTACTGGACGGCTCTGCTAATCGCGAGAGCTGGTTTGTGGACGCCCTCAACAGCGGCCGGCTCGAGCGAGGCCGCTCCGAGGCGTCTTCCATGGTATCTGAGGTGCCTGATTATCTCTTCGGCTTGGAGAACTCCGACGAGGTCCAAACGCGAGAACCAAGGTTGAAACCCCGAATGGTCCTCAACGACACCGTCTCCTGTTCGGATCCTGGTTCGCCCGCTCCGATTGTTTCATCTCCGTTTTGCTCCACCTCATCAGCTGCAAATGTGCCGTCCATGCCGAACCTCCCTCCAGTTAAAACCAAACCGGATAATCCGGTTCCTTTCATGGAATTGAAAGAACTTCAAATTGACGGATTTCAGAGAGGAAATCCAGGTGGCCAGAAGCCTCACTACCCGCCGGATTCTACTTATCCCGGTCCTTCTGTACAACCCGTTCCAGTTTACTACATTCCAGGTCATGTTCCAGTTCAGCATGGGCAGGTACCAGTCCAACCAGTCACAATTCAGGCGCCTTATGTTCAGCCATACCCGGCGGTGGTGCCAGCTCAGGTGCCGATGGGTTATCATCATGTGGTTCCAGGTTCGGCTCAAGCATACGCCGGAGGGATGAGACCCGTCGGTGGTGTGCATCCATACGAAGCGGTGGCGAGGATGGTTCCAGACAGCGTGCAGAGGCAGCACGCGTATCAAGCAGTTCCGAATTCCGGCGGTGTCCCTGTTTATCCGGTGATGGCGATGGCGATGGCGATGGCAAGTGCAAGTGGGGACGAATCTCAGAGAGGTGGAGCGGAATATGGGACGGGTCGGGGCCCCAACATGGGTGATTGA 1170 0.5556 MCSFGGRILPRPLDNQLRYVGGDTRIVAVHRSVSFSALLLRLSKLSGTTNITVKYQLPNEELDALISVTTDEDVGNMMEEYERVAQNQNPRSARLRLFLFVKGEDSRTNSISSLLDGSANRESWFVDALNSGRLERGRSEASSMVSEVPDYLFGLENSDEVQTREPRLKPRMVLNDTVSCSDPGSPAPIVSSPFCSTSSAANVPSMPNLPPVKTKPDNPVPFMELKELQIDGFQRGNPGGQKPHYPPDSTYPGPSVQPVPVYYIPGHVPVQHGQVPVQPVTIQAPYVQPYPAVVPAQVPMGYHHVVPGSAQAYAGGMRPVGGVHPYEAVARMVPDSVQRQHAYQAVPNSGGVPVYPVMAMAMAMASASGDESQRGGAEYGTGRGPNMGD 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1854 389 Gene3D - 18 102 - -
Lele16g1854 389 CDD PB1_UP2 1 100 - -
Lele16g1854 389 PANTHER OS05G0427100 PROTEIN-RELATED 1 327 - -
Lele16g1854 389 MobiDBLite consensus disorder prediction 369 389 - -
Lele16g1854 389 SUPERFAMILY CAD & PB1 domains 14 109 - -
Lele16g1854 389 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 17 102 - -
Lele16g1854 389 SMART PB1_new 12 102 IPR000270 GO:0005515
Lele16g1854 389 Pfam PB1 domain 14 101 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1854 Lele-ChrLele16 11061693 11062959 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1854 1 100 MAP Kinase Kinase Kinase AT3G46920 49.000 5.89e-27 111