Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1849 ATGCTGCTGAAAGACACAGAACAGATCGTCATTCATGGCAAACTAGAATCGACAGTTGTGCGGATTATGGGATTCAGACATATTCTTAATTTGATTAATGTTGTCTTCCTAATTTCCATCTTCTGTGTGGCTTTAGTCTCTGCCAAAGATACGATTACATCAGCCCAGTTCATCAGAGATTCTGAGACACTGAGCTCAAACAGCACTGACTTCAAACTAGGATTCTTCAGCCCTCCGAATTCAACACATCGCTTTGTGGGAATCTGGTATCTCTCTCGAGACAACCTCGTATGGGTGGCTAACAGAGACCAACCCATCAACGATTCTTCCGGGGTCATCACAGTTTCCCAGGACGGCAACCTTGTGGTATTGAATGGACAAAAACATGTCGTCTGGTCGTCAAACGTGTCATACATTGGCACAAACACGACAACGGCCCAGCTTCAAGATTCTGGCAACCTCGTCCTCCAAGTGTTTGATGATAACACTGGAATGAAATCACTATGGCAGAGCTTTGAACATCCCGCTGATGCAGCAGTTCCAAACATGAAGATCAGTGCCAACAGATTCACAGGGAAGAAGATAGAGTTTGTGTCATGGAAAAGCCCTTCTGATCCATCACCTGGGTTCTTCTCTGCGAGTCTCGAACGCCTTGTTCTTCCAGAAGTTTTCTTGTGGGTCAATAGAACTCAGCCCTATTGGCGAACGGGTCCATGGAATGGAAGGGTCTTCATCGGAGCACCACTGATGTCAACTGGGTATTTATATGGATGGTCTCTGAGAAATCAAGATGATGGAACTGTTTATGTAACTTACAGTTTCATTGACCATGCTGCTTCTGGAATTCTTCAATTGAACCCACAAGGAAAGCTTAGATTGGTAAGGTTCTACAACAAGAAGAAATATCTGGATGTGGTATTGGATCTAGAAGACTGTGATCACTACGGCATGTGTGGGGACTTTGGGAGCTGTAATCAACAGAGTACACCAATGTGTAGGTGCTTAACTGGGTTTGAACCAAAGGTTACAGAGGAATGGAAAAGACAGAATTGGACAAGTGGGTGTGTGAGAAAGTCAGCGTTGATGTGTGAGAGCTTGAAGAATGGAAGTTATAAAGCTGGGGAAGAAGATGGGTTTCTGAGATTTCAGAATATGAAAGTGCCAGATTTTGCAGAAAGGTCAGGTGTTGACACAGAAGCTCAATGCGGAACCGAGTGCTTGAAGAATTGCTCTTGTTTGGCATATGCATTTGATACTGGCATTGGATGCATGTATTGGACTCAGCCCTTGATTGACATACAAGAATTCTCTAATGAAGGAGTTGATCTTTACATTCGTGTGGCTCATTCAGAACTTGGAAACGGGTCTGAGAAAAGCACAAATAAGAGAAAAATCATCGCAGTTACAGTATCGATAGGAATGGTTATCTTAGTTGCATTTGTATGCCTATTAGTCATCTATACCTGTGGCTCTCGGAGCAAAACGGTCCATAAGCAAAGTGAAAATCAGAGTCAAAGAGTGAATGACGGCAACAAACGAGTTAAGTTAGATGAGCTTCCAGTATTTGATTTTGAAGAGGTTGCATCTGCTACAAATAACTTTCACTTAGCTAACATGCTAGGGAAGGGTGGTTTTGGTCCAGTTTACAAGGGAACATTGCAAGATGGTCAGGAAATTGCAGTAAAAAGGCTGTCCAGAGCATCCGGACAAGGGCAAGAAGAATTCATGAATGAGGTGTTAGTCATCTCGAAACTTCAACATCGCAATCTTGTAAAACTTCTTGGTTGTTGCATTGAAGGAGATGAAAAGATGTTAATATATGAATTTATGCCAAATAAAAGCTTGGACGCTTTTCTCTTTGATCCAACCCAAAGAAAATTTTTGGATTGGAGAAAACGATATAATATAATTGAAGGAATAGCTCGAGGTTTGCTTTATCTTCATAGAGATTCTAGACTAAAAATCATACACAGAGACTTGAAAGCAAGTAATATCTTGTTGGATGGGGAAATGAATCCAAAAATATCAGATTTTGGTCTAGCTAGAATTTTTGGAGCAACCGAAGATGTAGTAAATACTAAAAGAGTCGTTGGAACATATGGTTACATGTCTCCAGAATATGCAATGGAAGGTTTGTTTTCCGAAAAATCAGATGTCTACAGTTTTGGAGTTTTGTTATTAGAGATTGTTAACGGAAAAAGAAATAGCAGCTTCCACACTGATGAAGAGTCTCTTAGCCTTATAGGACTTGCATGGAGGCTATGGAATGAAGAGAAAATTGTGTCTTTAGTAGATCCAGATATATGGGATTCATGCAATGAGAGCGAAATATTGAAGTGCATACACATAGGGCTTCTATGTGTGCAAGAATCAGCGAAAGAAAGGCCAAGCATGACCAATGTGGTTATGATGCTTATAAGTGAGAATGTTCATCTTCCTCCTCCAAAGCAAGTAGCATTTGTGCATAAGCATTGGGCTTCAAGTTCAGAGTCCTCTAATTCTAAGGAACGTGAATTTAATTCCCTAAATAATGTAACTCTTACTGATATGCAAGAGAACGGTGCTTCAGAGGTCATTAGTGCATACCTTAACCGAGCTTCTGCTTCTTTGAACGAACTGAATCGGCTTCATAAGGAGTTCAAAGGGAACAGATCTCATGATTATGAATACAAGGAGAGAGTTATGTCAAATTCTATTCACAACCTTATAATAAGGCATCAGTTAGGGAATTGA 2733 0.4076 MLLKDTEQIVIHGKLESTVVRIMGFRHILNLINVVFLISIFCVALVSAKDTITSAQFIRDSETLSSNSTDFKLGFFSPPNSTHRFVGIWYLSRDNLVWVANRDQPINDSSGVITVSQDGNLVVLNGQKHVVWSSNVSYIGTNTTTAQLQDSGNLVLQVFDDNTGMKSLWQSFEHPADAAVPNMKISANRFTGKKIEFVSWKSPSDPSPGFFSASLERLVLPEVFLWVNRTQPYWRTGPWNGRVFIGAPLMSTGYLYGWSLRNQDDGTVYVTYSFIDHAASGILQLNPQGKLRLVRFYNKKKYLDVVLDLEDCDHYGMCGDFGSCNQQSTPMCRCLTGFEPKVTEEWKRQNWTSGCVRKSALMCESLKNGSYKAGEEDGFLRFQNMKVPDFAERSGVDTEAQCGTECLKNCSCLAYAFDTGIGCMYWTQPLIDIQEFSNEGVDLYIRVAHSELGNGSEKSTNKRKIIAVTVSIGMVILVAFVCLLVIYTCGSRSKTVHKQSENQSQRVNDGNKRVKLDELPVFDFEEVASATNNFHLANMLGKGGFGPVYKGTLQDGQEIAVKRLSRASGQGQEEFMNEVLVISKLQHRNLVKLLGCCIEGDEKMLIYEFMPNKSLDAFLFDPTQRKFLDWRKRYNIIEGIARGLLYLHRDSRLKIIHRDLKASNILLDGEMNPKISDFGLARIFGATEDVVNTKRVVGTYGYMSPEYAMEGLFSEKSDVYSFGVLLLEIVNGKRNSSFHTDEESLSLIGLAWRLWNEEKIVSLVDPDIWDSCNESEILKCIHIGLLCVQESAKERPSMTNVVMMLISENVHLPPPKQVAFVHKHWASSSESSNSKEREFNSLNNVTLTDMQENGASEVISAYLNRASASLNELNRLHKEFKGNRSHDYEYKERVMSNSIHNLIIRHQLGN 910
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1849 910 CDD B_lectin 56 175 IPR001480 -
Lele16g1849 910 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 45 172 - -
Lele16g1849 910 SUPERFAMILY alpha-D-mannose-specific plant lectins 86 206 IPR036426 -
Lele16g1849 910 Coils Coil 863 883 - -
Lele16g1849 910 Pfam PAN-like domain 375 433 IPR003609 -
Lele16g1849 910 Gene3D Phosphorylase Kinase; domain 1 508 609 - -
Lele16g1849 910 Pfam Protein tyrosine and serine/threonine kinase 535 804 IPR001245 GO:0004672|GO:0006468
Lele16g1849 910 Pfam D-mannose binding lectin 96 201 IPR001480 -
Lele16g1849 910 Gene3D - 44 172 IPR036426 -
Lele16g1849 910 CDD PAN_AP_plant 372 448 - -
Lele16g1849 910 PIRSF SRK 21 853 IPR024171 GO:0004674
Lele16g1849 910 Gene3D Transferase(Phosphotransferase) domain 1 610 812 - -
Lele16g1849 910 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 610 813 - -
Lele16g1849 910 SMART ntp_6 374 447 IPR003609 -
Lele16g1849 910 SMART serkin_6 534 807 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele16g1849 910 SMART blect_4 55 175 IPR001480 -
Lele16g1849 910 ProSitePatterns Serine/Threonine protein kinases active-site signature. 655 667 IPR008271 GO:0004672|GO:0006468
Lele16g1849 910 ProSiteProfiles Protein kinase domain profile. 534 812 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele16g1849 910 Pfam S-locus glycoprotein domain 234 341 IPR000858 GO:0048544
Lele16g1849 910 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 35 797 - -
Lele16g1849 910 CDD STKc_IRAK 540 805 - -
Lele16g1849 910 ProSiteProfiles PAN/Apple domain profile. 363 448 IPR003609 -
Lele16g1849 910 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 497 609 - -
Lele16g1849 910 SUPERFAMILY Protein kinase-like (PK-like) 518 829 IPR011009 -
Lele16g1849 910 ProSiteProfiles Bulb-type lectin domain profile. 49 169 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1849 Lele-ChrLele16 11039080 11044410 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1849 468 820 Receptor kinase-like Gene Family AT4G23230 55.524 8.90e-129 400
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele16g1849 PK_Tyr_Ser-Thr 6.3e-50 CL0016