Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1845 ATGGCAGAAGAGTTTGAAGCTGCAGGGATGATTTATGGCGGGAATTGGTGGAATATGATGAATACTTGTTCATCATCATCACTCTGTTCTATTGCAGCAAATAACGACGGAGGCAATTACTTTAGTTGCTCATGGCAAACTCATCATAATCTAGTGGATCTCAAGTCTAATGATTCTCTGGGTTTTCTCGTTCAGCCGAAGCAAAACCAGAATGAATCATCATCATCACCATCAGCTTCTGGAAATAATAATGGAAACATATTAATGGATTCCACCTTGGCCTTTGCCCTCTCTCCTTCTTCCAATTTACTTGGGAGACCAGAAAGCAATAATTTCCAATCTGTGCTTGAAGAAGAGGGTGGTGGTGTAGATTCTTCGAATTCAGAAATGAAAACCATGAACCAGGAATTTGCCATAGATTATCAACAGAATCTGAGTTCTTACGGCCTGTATGATGATGAACACAACAATCCTCTTCATCGTTTTCAACCAGAGGAATTCTTTTTCACCAACCCTTCTGTGGCTTTCATTACTTATAATTCAACCAATCAAGTTTCGCCAACTTGGTCCAAACCCTCTGATCATGATCACTTTTTGAAGCCTTCTTCAATGCCAAAGCAACAGCTCGCTGGATTCCACTTTTCAAACAACAACAATAATAATAATCCTTTTTGGAATAACGCTTCAGCTGATGACGTACCACCACCACCACCACCACATGTTTTGGCTTCATCCCCACAATCTCAAACTTTTGAACGCAAACCCACCAGTTACACGCCTCTCTTAACCAAGGATGTTTTGTCGACTTCCAAAACACAACTAAACGTTGAGACGATCCATTTACAGCACAAAAGAGAAGAAGCTCATGTTAGTGATGACCCATCAGCTGATGCATTCAAAAGGCCCAGAATTGAAACCCCATCACCTCTGCCAACTTTCAAGGTTCGGAAAGAAAAGTTAGGGGACCGAATAACTGCTCTTCAGCAATTGGTTTCACCTTTTGGAAAGACTGACACAGCATCTGTTCTCCACGAAGCCATCGAGTACATCAAGTATCTTCATGATCAAGTCAGTGTTTTGAGTGCTTCATATTTGAACAATAACGGAACTCCTGTCCAACACTATCAGGGTTGTGATGAGAAAGAATCAAAGCAAGATTTAAGAAGCCAAGGGCTGTGCTTGGCACCGATATCGAGCACATTCACACTTGCTAAGTATGAGATGATGGCTAATGAGTTATGGCCGACTGCATATGGAGGAGCTCTCAATCTCATGGGATAG 1281 0.4169 MAEEFEAAGMIYGGNWWNMMNTCSSSSLCSIAANNDGGNYFSCSWQTHHNLVDLKSNDSLGFLVQPKQNQNESSSSPSASGNNNGNILMDSTLAFALSPSSNLLGRPESNNFQSVLEEEGGGVDSSNSEMKTMNQEFAIDYQQNLSSYGLYDDEHNNPLHRFQPEEFFFTNPSVAFITYNSTNQVSPTWSKPSDHDHFLKPSSMPKQQLAGFHFSNNNNNNNPFWNNASADDVPPPPPPHVLASSPQSQTFERKPTSYTPLLTKDVLSTSKTQLNVETIHLQHKREEAHVSDDPSADAFKRPRIETPSPLPTFKVRKEKLGDRITALQQLVSPFGKTDTASVLHEAIEYIKYLHDQVSVLSASYLNNNGTPVQHYQGCDEKESKQDLRSQGLCLAPISSTFTLAKYEMMANELWPTAYGGALNLMG 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1845 426 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 98 401 - -
Lele16g1845 426 MobiDBLite consensus disorder prediction 209 228 - -
Lele16g1845 426 Gene3D - 314 369 IPR036638 GO:0046983
Lele16g1845 426 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 304 353 IPR011598 GO:0046983
Lele16g1845 426 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 314 366 IPR036638 GO:0046983
Lele16g1845 426 MobiDBLite consensus disorder prediction 209 254 - -
Lele16g1845 426 CDD bHLH_AtbHLH_like 310 361 IPR045239 -
Lele16g1845 426 MobiDBLite consensus disorder prediction 285 310 - -
Lele16g1845 426 MobiDBLite consensus disorder prediction 285 300 - -
Lele16g1845 426 FunFam Transcription factor bHLH123 family 314 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1845 Lele-ChrLele16 11001385 11004187 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1845 217 420 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G61660 44.076 8.53e-41 147