Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1834 ATGGATACTGCAGGTGGTGACTTCAATGGAGGTAATAATTCAACAAACAACAACAACTATACCGCTTATGACCCTGCCGATCAATTCAACAACGAATCTGCAGCCTTAGGTTCTGATCTGGTTGGCATTTTGGATATGTTGGCTTTTTTTTCAGATGTCACAAGTGAACTTGATCAGCCTGCTGATGATGGTGGACATGTTTTAATGGTGGTGTTGCTGAATTTATGGAGCAATATTTGAAAGAAGAAGAAGAAGAAGGAAGCACAGAGGAAAAGTTGGACTGTTGTATTTGCCGTGAAGACTTTTCAAATGACCCTAATGCCTTGCTGGCATTTGTTTCACTTCAAATGCATCTCTGGCTGGCTCCATATTTGCAATACGTGTCCTCTTTGTCGGTTTGAGTTGCCCCCAGCTTATTAA 420 0.4143 MDTAGGDFNGGNNSTNNNNYTAYDPADQFNNESAALGSDLVGILDMLAFFSDVTSELDQPADDGGHVLMVVLLNLWSNIXKKKKKKEAQRKSWTVVFAVKTFQMTLMPCWHLFHFKCISGWLHICNTCPLCRFELPPAY 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1834 139 MobiDBLite consensus disorder prediction 1 24 - -
Lele16g1834 139 Pfam RING-H2 zinc finger domain 102 132 IPR024766 GO:0008270
Lele16g1834 139 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 82 137 IPR013083 -
Lele16g1834 139 SUPERFAMILY RING/U-box 104 137 - -
Lele16g1834 139 ProSiteProfiles Zinc finger RING-type profile. 106 132 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1834 Lele-ChrLele16 10924026 10924627 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1834 103 136 C3H Transcription Factor Family AT5G01980 55.882 1.51e-09 53.1