Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1831 ATGTCTATAACCGAGCCTTTTAAGAAATTAATGAGATGTGTTATCCTTGATTTGGATGGGACTTTGCTTAACACAGATGGCATCCTAGGTGATGTCTTGAACGTTTTCCTAGCGAAGTATGGAAAGCAATGGGATGGAAGGGAAGTTCATAAGATGGTAGGAAAGACACCACTTGAATGTTCTGCTATAACAGTGGAAGATTATGGTCTTCCTTGCTCAGCAAGTGAATTTCTTTCTGGAATTCAACCAATTTTTTCTGATCAGTGGGGCAATATCAAAGCACTTCCTGGGGCCAATCGACTGATTAAACATTTGAAGAAACATGGTGTTCCAATGGCCTTGGCATCAAACTCTCTAAGGGAAAGCGTAGAAGACAAAATATCTTTCCATGATGGATGGAAAGATTCTTTCTCTGTTATAATTTGTGGAGATGAAGTCAGAACTGGGAAACCTTCTCCTGAAATATTCCTTGAAGCTGCTAAAAGGTTAAATGTTGAGCCTTCCAGCTGTCTTGTCATTGAGGACTCTCTACCTGGTGTTACTGCAGGTAAAGCTGCTGGAATGGAAGTAATTGCTGTACCATCACTTCCTAAACAGTCCCATCTCTACACTGCTGCAGATGAGGTCATCAATTCCCTACTTGATTTACACCTTGAGAAGTGGGGTCTGCCTCCATTCGAAGATTGGGTGGAGGGTACTTTGCCAATAGATCCTTGGTGTATTGGTGGTCCTGTTATCAAGGGATTTGGTCGTGGCTCAAAGGTACTGGGGATCCCTACAGCTAATTTGTCAACTGAAGGCTATTCAGATCTCCTTACGCTACATCCTGCGGGTGTTTATTTTGGTTGGGCTGGATTATCTGGAAGAGGTGTTTATAAAATGGTCATGAGCATAGGCTGGAATCCATATTTCGACAACAAGGAAAAGACCATAGAACCCTGGTTACTACATGAATTTAAGGAGGATTTCTATGGGGAAAAACTGCGTCTTGTCATCGTTGGTTATATACGTCCGGAGGCCAATTTTCCATCCCTTGAAAGTCTGGTAGCTAAGATTCATGAAGATGGAAGAATTGCTGAAAGAGCCCTTGATCTTCCATTGTATTCAAGTTACAAGAATGACCCATATTTGAGCAGCTCATAG 1143 0.4199 MSITEPFKKLMRCVILDLDGTLLNTDGILGDVLNVFLAKYGKQWDGREVHKMVGKTPLECSAITVEDYGLPCSASEFLSGIQPIFSDQWGNIKALPGANRLIKHLKKHGVPMALASNSLRESVEDKISFHDGWKDSFSVIICGDEVRTGKPSPEIFLEAAKRLNVEPSSCLVIEDSLPGVTAGKAAGMEVIAVPSLPKQSHLYTAADEVINSLLDLHLEKWGLPPFEDWVEGTLPIDPWCIGGPVIKGFGRGSKVLGIPTANLSTEGYSDLLTLHPAGVYFGWAGLSGRGVYKMVMSIGWNPYFDNKEKTIEPWLLHEFKEDFYGEKLRLVIVGYIRPEANFPSLESLVAKIHEDGRIAERALDLPLYSSYKNDPYLSSS 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1831 380 Gene3D Putative phosphatase; domain 2 25 87 IPR023198 -
Lele16g1831 380 PANTHER RIBOFLAVIN KINASE/FMN ADENYLYLTRANSFERASE 12 378 IPR023468 -
Lele16g1831 380 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 11 22 IPR006439 -
Lele16g1831 380 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 137 153 IPR006439 -
Lele16g1831 380 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 155 175 IPR006439 -
Lele16g1831 380 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 105 118 IPR006439 -
Lele16g1831 380 SMART Flavokinase_2 234 364 IPR015865 GO:0008531|GO:0009231
Lele16g1831 380 FunFam Bifunctional riboflavin kinase/FMN phosphatase 88 213 - -
Lele16g1831 380 SFLD Haloacid Dehalogenase 11 216 - -
Lele16g1831 380 SUPERFAMILY Riboflavin kinase-like 238 377 IPR023465 GO:0008531|GO:0009231
Lele16g1831 380 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 91 193 IPR006439 -
Lele16g1831 380 Gene3D - 88 222 IPR023214 -
Lele16g1831 380 SUPERFAMILY HAD-like 11 217 IPR036412 -
Lele16g1831 380 FunFam Haloacid dehalogenase-like hydrolase domain 25 92 - -
Lele16g1831 380 Pfam Riboflavin kinase 238 362 IPR015865 GO:0008531|GO:0009231
Lele16g1831 380 FunFam Haloacid dehalogenase-like hydrolase domain-containing protein 1A 227 380 - -
Lele16g1831 380 Pfam Haloacid dehalogenase-like hydrolase 14 193 IPR041492 -
Lele16g1831 380 Gene3D - 227 380 IPR023465 GO:0008531|GO:0009231
Lele16g1831 380 SFLD C1.5.6: HAD, Beta-PGM, Phosphatase Like 11 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1831 Lele-ChrLele16 10900682 10907356 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele16g1831 16 10900682 10907356 Lele13g0686 13 18921019 18925043 CCT
Lele16g1831 16 10900682 10907356 Lele14g0585 14 17326423 17331179 CCT
Lele16g1831 16 10900682 10907356 Lele15g1798 15 10901937 10905949 CCT
Lele16g1831 16 10900682 10907356 Lele16g2071 16 12996705 12997517 CCT