Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1810 ATGGTAGAAATATGGAATACGTGGGAAGAGCTGTTGTTGGGAGGAGCAGTTCTTCGACATGGAACTCAACGTTGGCATATCGTTGCTTCAGAACTCCAAACACAAATTCCCAATTGTGTTTTTACTCCCCAGCTTAGGAAGAAAAGAGTAGCAGAGTTGAAGAGATCTTTGGAGCTCTCTGAAAATTCAATTGGTTTTCTTGAATCAAAAATTAAATCTCTCGAGGCTGAGACCAACAAGAAAGAAAGAGATAATAGTTCTTATTTCACAGAAGAGACTATATCTGCTGGTAGCTTCACGCATGAAATTTCAGAAAACTTCTCTCCTGAAGTGGCAGGCTCGTGTGATGAAGAGTACGAGAAAACTTCAAATGCAGCGGACATGTCGGCATATTATTTTTCTGCCAACATAGGACAACTTAGATGGAGTAATATGAAGAAGAGAAGAAGCAAGAGGAAGAGGAAGGATTATAGCAGAGACTATGGTAGTCGGTTTGAAAACGCCGACTCAAGTTCACTCGCACTTGGCATCCCGACAAAAAACAACAAGCGTGTGGAGGACAAAGAGTTTTTGTCGGACACTTCGGATGATGATCACGTTGTCGTGGCTGGTTGTGAAGAATTTTCATCTAGCAGAAACTGTAAGGATCAAAGTTTAAACGATGATGAAATGGAAAACTTTCTCGCCATTTTGGAATCGATCATGGAAAATAAAGTAGCTTCTGTTTTTTTACATCGCCTGTATAGTCAGAAGAGACGTAGGTACGAGAAGATGATAAGGAGGCACATGGATTTGGAGACCATAAGATATAGGATCATAACCAAAGCCATAAAATCAAGGATGGAGCTTTTCGTTGACCTACTTGTTGTCACAAACAATGCTCTCGTCTTCTTCCCCAACACCACTCGCGAGTACAAATCTGCCCTAATTCTCAGAGACCTTGTAACCCTAAAACTCAGTAATCTTCAACACTTTGCGATCAAATCATCATCCCAAAAGGATATTATGAATGCTTCTCCGAGCAGTGTAATAATAAGACCAGGAAATAGAAGGATCGTAGCATCAAAGACGGCTGATCACAAATTCCCATGCAAACTCACTTGTAATTCATCTTTCATTGAGAAGGCAAACAAAAGAGCCAGAGTAACTTGCAACTAG 1158 0.4059 MVEIWNTWEELLLGGAVLRHGTQRWHIVASELQTQIPNCVFTPQLRKKRVAELKRSLELSENSIGFLESKIKSLEAETNKKERDNSSYFTEETISAGSFTHEISENFSPEVAGSCDEEYEKTSNAADMSAYYFSANIGQLRWSNMKKRRSKRKRKDYSRDYGSRFENADSSSLALGIPTKNNKRVEDKEFLSDTSDDDHVVVAGCEEFSSSRNCKDQSLNDDEMENFLAILESIMENKVASVFLHRLYSQKRRRYEKMIRRHMDLETIRYRIITKAIKSRMELFVDLLVVTNNALVFFPNTTREYKSALILRDLVTLKLSNLQHFAIKSSSQKDIMNASPSSVIIRPGNRRIVASKTADHKFPCKLTCNSSFIEKANKRARVTCN 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1810 385 Gene3D - 211 324 IPR036427 GO:0005515
Lele16g1810 385 ProSiteProfiles Bromodomain profile. 235 305 IPR001487 GO:0005515
Lele16g1810 385 SMART bromo_6 220 324 IPR001487 GO:0005515
Lele16g1810 385 Pfam Bromodomain 229 308 IPR001487 GO:0005515
Lele16g1810 385 Coils Coil 50 84 - -
Lele16g1810 385 CDD Bromodomain 230 315 - -
Lele16g1810 385 SUPERFAMILY Bromodomain 218 322 IPR036427 GO:0005515
Lele16g1810 385 PANTHER DNA-BINDING BROMODOMAIN-CONTAINING PROTEIN 3 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1810 Lele-ChrLele16 10707624 10709850 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g0702 13 19046785 19052286 Lele16g1810 16 10707624 10709850 CCT
Lele14g0599 14 17463365 17469346 Lele16g1810 16 10707624 10709850 CCT
Lele15g1780 15 10772167 10777618 Lele16g1810 16 10707624 10709850 CCT
Lele16g1812 16 10727656 10733485 Lele16g1810 16 10707624 10709850 CCT
Lele16g1810 16 10707624 10709850 Lele13g0706 13 19096834 19097718 CCT
Lele16g1810 16 10707624 10709850 Lele14g0603 14 17506180 17507046 CCT
Lele16g1810 16 10707624 10709850 Lele15g1776 15 10717805 10718683 CCT
Lele16g1810 16 10707624 10709850 Lele16g1808 16 10684273 10685139 CCT
Lele13g0711 13 19129846 19140050 Lele16g1810 16 10707624 10709850 CCT
Lele14g0608 14 17539934 17547284 Lele16g1810 16 10707624 10709850 CCT
Lele15g1771 15 10677334 10685472 Lele16g1810 16 10707624 10709850 CCT
Lele16g1803 16 10640970 10649345 Lele16g1810 16 10707624 10709850 CCT
Lele14g0601 14 17484312 17486554 Lele16g1810 16 10707624 10709850 hybridization