Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1801 ATGATGGGTGTGGATATTCTGTTAAAAATGAATTTTTTCTGCAGATTGGCTTTTGTACTTGTGCTATTAAGTGCGAAGCCTGTTGTCTCTTCGAGACATAGGCAACTGAGTTCTGGTGTTAGTAATGAAGATCTTGTCACCAACTTGCCTGGTCAGCCTCAGGCGGATTTCCGGCACTTTGCTGGCTTTGTCACTGTGAATGAAACTAATGGAAGAGCACTCTTTTACTGGTTTTATGAAGCCATCACCAATCCTCAAGAAAAACCCTTAGTGCTTTGGCTTAATGGAGGACCTGGGTGCTCTTCAGTGGGATATGGAGCAACACAGGAGATTGGTCCTTTTCTAGTGGACATTAATGGACAGGGTCTTAGATTTAATAACTTCTCATGGAACAGAGAAGCCAATGTTTTATTCGTGGAATCTCCTATTGGGGTCGGCTTTTCCTACTCAAACACAACCAGTGATTATGAACATATTGGAGATGACTTCACAGCTAACGATGCCTACAATTTTCTGGACAAGTGGTTTCTCAAGTTCCCGTCTTACAGAGCCAAGGCATTTTACATAGCAGGAGAGAGTTATGCAGGAAAGTATGTACCAGAGCTTGCTGAGCTCATCGTTGATAGGAACAAGACCCTTCATATTGATCTTAAGGGTATCATGCTGGGGAATCCAGAAACTTCTGATGCTGAGGACTGGATGGGGATCGTGGATTATGCATGGAGCCACGCGGTGGTGTCGGATGAAACTTACAGAACAATAAGAGAAAGCTGTGACTTCAAAGGCAGTGACCCATGGAAGAACCAAACTTGTTGTGATGCTGTGGATGAAGTTTTCTCACAGTACGGCAAGATTGATATCTATAGCATCTATACCTCTGTCTGCTTCGCCAGCACTGCTCGCTCCAATGATCAATCCCTTCAACAAAGCCTACGCGTAATGAAATATAAACGTTCTTCCAAAATGATGCCTAGGATCATGGGTGGTAGTTACGATCCATGTTTGGATGATTATGCGAGAGCTTTCTATAACAGACCAGATGTTCAGAAGGCTCTTCATGCCAGTGATGGTCATAGTCTCAAGAATTGGAGTATTTGCAACGACAAGATGTTCAACGATTGGGGAGATTCAAGAACATCTATGATCCCAATTTACAAGAAGCTTATTTCGGTAGGACTCAGAATCTGGGTTTATAGTGGAGACACAGATGGAAGAGTGCCAGTACTGTCGACAAGATACAGCTTAAGTACTCTGAATCTGCGGATAACCAAGCCATGGAGACCATGGTATCACGAGAACGAGGTAAGTGGGTGGTTTCAAGAGTACGAGGGGCTTACTTTTGCGACGTTTAGAGGAGCTGGACATGCAGTGCCTTGCTTCAAACCAAGCAATTCACTCGCACTCTTCTCTTCCTTTCTGCTTGGACAATCACCACCTTCTTCTAAATATTAA 1452 0.4366 MMGVDILLKMNFFCRLAFVLVLLSAKPVVSSRHRQLSSGVSNEDLVTNLPGQPQADFRHFAGFVTVNETNGRALFYWFYEAITNPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDINGQGLRFNNFSWNREANVLFVESPIGVGFSYSNTTSDYEHIGDDFTANDAYNFLDKWFLKFPSYRAKAFYIAGESYAGKYVPELAELIVDRNKTLHIDLKGIMLGNPETSDAEDWMGIVDYAWSHAVVSDETYRTIRESCDFKGSDPWKNQTCCDAVDEVFSQYGKIDIYSIYTSVCFASTARSNDQSLQQSLRVMKYKRSSKMMPRIMGGSYDPCLDDYARAFYNRPDVQKALHASDGHSLKNWSICNDKMFNDWGDSRTSMIPIYKKLISVGLRIWVYSGDTDGRVPVLSTRYSLSTLNLRITKPWRPWYHENEVSGWFQEYEGLTFATFRGAGHAVPCFKPSNSLALFSSFLLGQSPPSSKY 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1801 483 Gene3D - 381 475 - -
Lele16g1801 483 Gene3D alpha/beta hydrolase 41 297 IPR029058 -
Lele16g1801 483 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 45 462 IPR001563 GO:0004185|GO:0006508
Lele16g1801 483 SUPERFAMILY alpha/beta-Hydrolases 43 477 IPR029058 -
Lele16g1801 483 FunFam Carboxypeptidase 332 477 - -
Lele16g1801 483 Pfam Serine carboxypeptidase 51 474 IPR001563 GO:0004185|GO:0006508
Lele16g1801 483 FunFam Carboxypeptidase 40 297 - -
Lele16g1801 483 ProSitePatterns Serine carboxypeptidases, serine active site. 189 196 IPR018202 GO:0004185
Lele16g1801 483 Gene3D - 334 370 - -
Lele16g1801 483 FunFam Carboxypeptidase 381 475 - -
Lele16g1801 483 PRINTS Carboxypeptidase C serine protease (S10) family signature 126 138 IPR001563 GO:0004185|GO:0006508
Lele16g1801 483 PRINTS Carboxypeptidase C serine protease (S10) family signature 139 149 IPR001563 GO:0004185|GO:0006508
Lele16g1801 483 PRINTS Carboxypeptidase C serine protease (S10) family signature 445 458 IPR001563 GO:0004185|GO:0006508
Lele16g1801 483 PRINTS Carboxypeptidase C serine protease (S10) family signature 175 200 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1801 Lele-ChrLele16 10622598 10625772 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1801 339 476 Calmodulin-binding Proteins AT2G22960 34.532 3.45e-17 77.8