Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1798 ATGGATAGCACCGATTCATCTTCAGGGTGTCAGCATCCTCAGCTTCCTCCCGGATTCAGATTCCATCCCACCGACGAAGAGCTCGTCGTTCACTACCTCAAGCGAAAAGCCGCCTCTGCTTCGCTTCCCGTCGCCATCATCGCCGACGTCGATCTCTACAAGTTCGATCCGTGGGAGCTTCCAAGTAAGGCAGCTTTTGGGGAGCAAGAGTGGCTCACTGACAACAATTCTTACAATAATTCTACCCCTAAGCCTCTTCCTCTGGCTTCTGATCCTGCGTCACAATCCTCCAAGAAGAACTCGTTAAGGCTTGACAATTGGGTTCTGTGTCGAATATACAAGAAAAGCAATAGTAGTATGAAGACGAGTCTGCAAAGGCCGCCATTGATGGCGCAGGAGAGGGAGATTTGTATTGAGGCTATGCTTCCGACCATCTCAAGTTTATCAATGGCTAATACTGCCACCCACCAAAACCCTCCATTAGGACCTGAGAATGATGACAACTTGTTCCATGGATTTCTGGGAATCGGTGGCGGAGGAGGTGGTGGTGGTGGTGATTCTCATGATCATCGCTTGTCTGCCGTGAGACGACACCTGCCATCGCCGTTTTGGAACGAGACGACGGTGGGGTCTCCGTCGGGGGCGTCTTCGTCGAGCAAGAGATTCCACGGTGATCTGAACAGCACAGGGATGAGTACTACTTCAGCGGAGGAGAACAGTTCGTTCATTTCTCTTCTAAGCCAGTTTCCTCTCCATAATACGACTCCTTTTCTTGGCTCCGTCGGTGATGGTGTTTTGAGGCAGCAGTTTCAACTTCCAACAAGCCTGAATTGGACCTCATAA 843 0.5053 MDSTDSSSGCQHPQLPPGFRFHPTDEELVVHYLKRKAASASLPVAIIADVDLYKFDPWELPSKAAFGEQEWLTDNNSYNNSTPKPLPLASDPASQSSKKNSLRLDNWVLCRIYKKSNSSMKTSLQRPPLMAQEREICIEAMLPTISSLSMANTATHQNPPLGPENDDNLFHGFLGIGGGGGGGGGDSHDHRLSAVRRHLPSPFWNETTVGSPSGASSSSKRFHGDLNSTGMSTTSAEENSSFISLLSQFPLHNTTPFLGSVGDGVLRQQFQLPTSLNWTS 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1798 280 Gene3D NAC domain 24 85 IPR036093 GO:0003677|GO:0006355
Lele16g1798 280 MobiDBLite consensus disorder prediction 203 234 - -
Lele16g1798 280 ProSiteProfiles NAC domain profile. 15 198 IPR003441 GO:0003677|GO:0006355
Lele16g1798 280 MobiDBLite consensus disorder prediction 75 98 - -
Lele16g1798 280 Pfam No apical meristem (NAM) protein 16 71 IPR003441 GO:0003677|GO:0006355
Lele16g1798 280 SUPERFAMILY NAC domain 9 115 IPR036093 GO:0003677|GO:0006355
Lele16g1798 280 MobiDBLite consensus disorder prediction 1 21 - -
Lele16g1798 280 PANTHER NAC TRANSCRIPTION FACTOR 56 15 72 - -
Lele16g1798 280 MobiDBLite consensus disorder prediction 204 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1798 Lele-ChrLele16 10599540 10600782 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1798 1 280 NAC Transcription Factor Family AT3G15510 35.052 1.78e-39 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele16g1798 NAM 4.2e-16 No_clan