Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1787 ATGGCTTACAGACGCTGTCTCTTGATAAGAGGAAAGCTCATTGATCAGAAATGCCACCCTTCTCTAAGTTATCTTTTCCATAGTGATGAACGTAAACGTGAATGTCCAGATGAAAAATTATCTGCAGCAGAAGTTGGTCATCTTCTCCAAAGAAGGTCATTTGGAAGCTCTATAAATGTATCATCAGGGTTTGCTGCCTCTTCTCAGCATGCAATAAATTCAAACAGTTACCTTGTCCCGTGCTCTGGATATTCTTTTTGCCGATATATGTCTACAATCAATCAGGGTTCTACTAATATTGACTTCTCGAGTGATATAGCGAATGTCCTTACAGACACAACCATGGAGGCTGTTGCTTCTCAGGCTCCTGTACTTAATGAAGTTGCAGTCGCTGCTGCTGATTCCTATTTACCTGTTCAAGCTTTGCAGTATTTAATAGATTATGTGCATACCTTCACTGGATTAAACTGGTGGGCTTCTATCGCTCTAACAACCCTCCTTATTCGGGGTGCAACACTCCCACTCTTAATAAATCAACTCAAGGCGACCAGTAAGCTTACCCTAATGAGGCCTCACCTGGAGGAGATTAAGCAAGAGATGCAAGATAAGGCTATGGATCCCATGGCCGTTGCTGAAGGTCAAAACAAGATGAAGAAGCTGTTCAATGAATATGGTGTGAGTCCATTTACTCCATTGAAAGGACTCTTTATTCAAGGTCCTATCTTTGTCAGCTTCTTCCTTGCGATAACAAACATGGCTGAAAAGATGCCATCATTCAAAAATGGTGGAGCCTACTGGTTCCTTGATCTCTCAACACCAGATACCTTGTACATTCTGCCAATTCTGACTGCATTGTCATTCTTGATAACAGTAGAGTGCAATATGCAAGAAGGTATGGAAGGAAATCCTGCTGCTGTCACCATGAAAAATGTCTCTAGGGCTCTTGCTGTTCTTACAGTTCCTTTTACCATGGGATTTCCAAAGGCTATATTTTGTTACTGGATTACATCAAATTTGTTTTCACTTGGGTACGGACTTGGGCTTAAAGTTCCTGGCGTTAAGGAAGCATTACGCATTCCAAAAATACCTGCCGCAGCGCCCACCAGTGCACCACAATCCCCCTTCTCTTTTTTTCCAACGGCAAAGAAAGATTCATCGGCGGCAGTTGCGACAGAATCAAACTCAGTGCCGGTTGAACAATCGAAGAAACTTCCAGGTCAGAAGATATCTTCTTCATCTGTTATTAGTCAGAGGCTCAGAAGTTTAGAGAAACAAGTGAAAGGAAGAAAGAAGAACAAGCAGCCGAACATGGCCTCTATCTCATCATCATCTCTCTCTTTCTTGTCTTCCATTAATGCCTCTTCTTCTTCTTCTTCCTTATCTGCATTCTCTCGTCCTCGACCTTCCAGAAATACCAAACCAAAACGCTATCGTGTTTCCAAAATCTCATGCAAAGCCATGCATAATGACCCTGAAAACCCCAAAAACGTCTCCCAAGAAGATCAATTACAACTACCTCATGTTCTAGCTAATCGGAGGAATGTTGTCCTTGGCCTTGGAGGGCTTTGTGGTGCTGCCGCCACCAACCCTTTTGCCTTCGCTGCTCCGGTGTCCCCGCCGGACCTGACCACCTGTGGCCCTCCGGATCTACCTTCCGGCGCAAAACCAACCGATTGTTGCCCGCCATTTTCCTCAAATATCATAGACTTCAAGTTCCCTTCCTCTAACCAACCCCTTAGGGTCCGACCGGCGGCTCACTTGGTCACCGCCGACCATTTAGTAAAATACAAGAAAGCCGTTGAGCTCATGAAAGCCCTACCTTCCGATGACCCACGTAGCTTCACACAACAAGCTAACGTCCACTGTGCTTACTGTGATGGTGCTTATCACCAAGTAGGGTTTCCTGACCTCGATCTCCAAGTCCATAATTCTTGGCTTTTCTTTCCCTTTCATCGTTGGTACTTGTATTTCCACGAGAGAATCTTGGGGAGTTTGATCGGAGATCCCAGTTTTACGTTGCCGTTCTGGAATTGGGACTCTCCCGCTGGAATGCAGATTCCGGCGATTTACACGGATTCTGCGTCATCTCTGTATGATGCTCTTCGTAGTTCTAAACACCAACCTCCGGCGATCACTGACCTTGACTTTAATCTCGACAATGATGGTTCCACGTCTCAGAATAGCGTCGTCTCCAGTAATCTCACCATCATGTATAGGCAAATGATCTCCAACGCTAAAACTCCAAAGCTATTCTTGGGAAATACCTACCGAGCCGGAGATGACCCGGACCCCGGTGCTGGCTCGATCGAGAACATCCCTCACGGTCCGGTTCACTTATGGACCGGCGACGATACTCAGCCTAACTTCGAAAACATGGGAAACTTTTACTCAGCTGGCAGAGACCCCATTTTCTTCTGCCACCATTCCAACGTCGACAGAATGTGGAGCATATGGAAAACCCTAGGAGGCAAGAGAAGAGACATCTCCGACCAAGACTGGTTAAACTCCGGCTTTCTCTTCTACGATGAGAACAAGAACCTCATACGCGTCAAAGTCAAAGATTGCCTGGACACGAGAAAGCTAGGGTACATCTATCAAGACGTCGACATTCCATGGCTGAAATCTAAGCCCACACCACGTCGCAGGTCTTCGAAAGCTCAAAAGGTAGCCCTAATTCCTCAACTCTTTGGTGTTGGAGCAGCACAAGCTGCTGAGACTTCTTCAACATCCGTCAAGTTCCCTTTGGTTCTGGAGTCTACAGTGAGTACAGTTGTGAACAGGCCGAAGAAGGGAAGGAGCAAGAAGGAGAAGGAAGAGGAAGAGGAGGTGTTGGTGATTGAAGGGATTGAATTTGACAGAAATGATGCAGTGAAGTTCGACGTATTAATTAATGATGAAGATGATAAGGTTATTAGGGCAGATAACACAGAGTTTGCAGGAAGTTTTGTGAGTGTGCCCCACACGCACAAGCATAAGAACAAGAAAATTATTACATGTTTAAGGTTGGGATTGAGTGATTTGTTGGAGGATTTAGAAGCCGAGGACGATGATAGTGTTCGTGTGACTTTGGTTCCGAGGTATGGGAAAGGGCGTGTCACGATCAGAGGCATAAAGATTGAGCTTATTGCAGACTGA 3135 0.4542 MAYRRCLLIRGKLIDQKCHPSLSYLFHSDERKRECPDEKLSAAEVGHLLQRRSFGSSINVSSGFAASSQHAINSNSYLVPCSGYSFCRYMSTINQGSTNIDFSSDIANVLTDTTMEAVASQAPVLNEVAVAAADSYLPVQALQYLIDYVHTFTGLNWWASIALTTLLIRGATLPLLINQLKATSKLTLMRPHLEEIKQEMQDKAMDPMAVAEGQNKMKKLFNEYGVSPFTPLKGLFIQGPIFVSFFLAITNMAEKMPSFKNGGAYWFLDLSTPDTLYILPILTALSFLITVECNMQEGMEGNPAAVTMKNVSRALAVLTVPFTMGFPKAIFCYWITSNLFSLGYGLGLKVPGVKEALRIPKIPAAAPTSAPQSPFSFFPTAKKDSSAAVATESNSVPVEQSKKLPGQKISSSSVISQRLRSLEKQVKGRKKNKQPNMASISSSSLSFLSSINASSSSSSLSAFSRPRPSRNTKPKRYRVSKISCKAMHNDPENPKNVSQEDQLQLPHVLANRRNVVLGLGGLCGAAATNPFAFAAPVSPPDLTTCGPPDLPSGAKPTDCCPPFSSNIIDFKFPSSNQPLRVRPAAHLVTADHLVKYKKAVELMKALPSDDPRSFTQQANVHCAYCDGAYHQVGFPDLDLQVHNSWLFFPFHRWYLYFHERILGSLIGDPSFTLPFWNWDSPAGMQIPAIYTDSASSLYDALRSSKHQPPAITDLDFNLDNDGSTSQNSVVSSNLTIMYRQMISNAKTPKLFLGNTYRAGDDPDPGAGSIENIPHGPVHLWTGDDTQPNFENMGNFYSAGRDPIFFCHHSNVDRMWSIWKTLGGKRRDISDQDWLNSGFLFYDENKNLIRVKVKDCLDTRKLGYIYQDVDIPWLKSKPTPRRRSSKAQKVALIPQLFGVGAAQAAETSSTSVKFPLVLESTVSTVVNRPKKGRSKKEKEEEEEVLVIEGIEFDRNDAVKFDVLINDEDDKVIRADNTEFAGSFVSVPHTHKHKNKKIITCLRLGLSDLLEDLEAEDDDSVRVTLVPRYGKGRVTIRGIKIELIAD 1044
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1787 1044 PANTHER TYROSINASE FAMILY MEMBER 512 1026 - -
Lele16g1787 1044 SUPERFAMILY Di-copper centre-containing domain 539 873 IPR008922 -
Lele16g1787 1044 MobiDBLite consensus disorder prediction 456 478 - -
Lele16g1787 1044 TIGRFAM yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 156 342 IPR028055 -
Lele16g1787 1044 Pfam 60Kd inner membrane protein 157 343 IPR001708 GO:0016020|GO:0032977
Lele16g1787 1044 Pfam Polyphenol oxidase middle domain 827 878 IPR022739 GO:0004097
Lele16g1787 1044 ProSitePatterns Tyrosinase and hemocyanins CuB-binding region signature. 801 812 IPR002227 GO:0016491
Lele16g1787 1044 MobiDBLite consensus disorder prediction 389 416 - -
Lele16g1787 1044 PRINTS Tyrosinase copper-binding domain signature 800 818 IPR002227 GO:0016491
Lele16g1787 1044 PRINTS Tyrosinase copper-binding domain signature 673 678 IPR002227 GO:0016491
Lele16g1787 1044 PRINTS Tyrosinase copper-binding domain signature 773 784 IPR002227 GO:0016491
Lele16g1787 1044 PRINTS Tyrosinase copper-binding domain signature 642 659 IPR002227 GO:0016491
Lele16g1787 1044 ProSitePatterns Tyrosinase CuA-binding region signature. 642 659 IPR002227 GO:0016491
Lele16g1787 1044 Gene3D - 535 874 IPR008922 -
Lele16g1787 1044 FunFam Polyphenol oxidase, chloroplastic 535 874 - -
Lele16g1787 1044 Pfam Protein of unknown function (DUF_B2219) 913 1041 IPR022740 GO:0004097
Lele16g1787 1044 Pfam Common central domain of tyrosinase 611 820 IPR002227 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1787 Lele-ChrLele16 10513715 10524293 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g0727 13 19253614 19262545 Lele16g1787 16 10513715 10524293 hybridization
Lele14g0623 14 17652899 17658064 Lele16g1787 16 10513715 10524293 hybridization