Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1759 ATGGCAGAAAGATTAACGGAGCTGAAGAAGCTCAACAACAGAGCTGCAGCTGATGGTGGCCAATCTCTAAGGGGACGGTGCGTGGCGCCATTTCTGCTGAAGACGTATGATTTGGTGGAAGAAGGCGGAGATGATGAAGAAGAAGAAGAAGAAAGGAAAAGATCAATAGTGACATGGAACGAGGAAGGAGATGGTTTTATAGTGTGGCGTCCTACAGAATTCTCAGAGCTCATATTGCCCAGATATTTCAAGCACAACAACTTTTCCAGCTTCATCCGCCAATTGAACACCTACGGATTTAAGAAAGTGTCGTCAAAGAGATGGGAATTCAAGCAGGAGAAATTTCAGAGAGGTTGCAAGAACATGTTGGCGGAGATACCAAGGAAGAAGTGCGAGGCAAGTGTGTTCCCTTCATACTTGAAGTCTTGTTCTGAAGAAAATGCAGCCACAAGCTGTGCAGGAGATAAAGATCATGAATTACTGGTACAGCAAAACCAAGACCTCAAGAAGCAGAACCAGCACCTTCAATCCCAAATTGCTAAGTTCAAACAATTACAAACCAGGTTGTTGCACTGCGTCTCTCAATACATGGGCACCCCCCAAAATTGA 609 0.4466 MAERLTELKKLNNRAAADGGQSLRGRCVAPFLLKTYDLVEEGGDDEEEEEERKRSIVTWNEEGDGFIVWRPTEFSELILPRYFKHNNFSSFIRQLNTYGFKKVSSKRWEFKQEKFQRGCKNMLAEIPRKKCEASVFPSYLKSCSEENAATSCAGDKDHELLVQQNQDLKKQNQHLQSQIAKFKQLQTRLLHCVSQYMGTPQN 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1759 202 Coils Coil 158 185 - -
Lele16g1759 202 ProSitePatterns HSF-type DNA-binding domain signature. 79 103 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele16g1759 202 Pfam HSF-type DNA-binding 31 129 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele16g1759 202 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 26 193 IPR027725 -
Lele16g1759 202 SUPERFAMILY "Winged helix" DNA-binding domain 28 129 IPR036390 -
Lele16g1759 202 SMART hsfneu3 27 129 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele16g1759 202 FunFam Heat stress transcription factor A-6b 24 130 - -
Lele16g1759 202 Gene3D - 24 130 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1759 Lele-ChrLele16 10298210 10301279 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1759 16 199 HSF AT5G62020 34.884 4.09e-38 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Lele16g1759 HSF_DNA-bind 5.5e-29 CL0123