Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1744 ATGGAAGAAGATTCCACTTCATGGATAAGAAGGACGAAATTCTCTCACACTGTGTGCCACCGATTGGACTCTTCGAGATTGGCCTCGATTCCTCTCCGCATTGAGTCCGAAGTCGGTTCAGGTCTCAAATCGAGGCCTACTGTTTCGTTCAATCTGAACCATATAGCTGATGCTCCAAAGATGCATCAAAATCCTAATGTGAAAAAGCCGAGATCTGTCTCCCCTTTGCCGGAAACATCCCTCTCTGACACTTTCCGCGAAGCTAAGCATGAACGAAAGAGGTTCTCAACTCCAGGTCCTCGGAGGAAAGAACATCATGAGAAGAGGATCATGGGGAAGGTGTCGAATAAGGACTCTCGAGATGTCAAAACACCGAATTTGAAATCGCCATCGCGAAGTCCGATCTTGTCGAGTTCGAAATCGAGCGATAGCCTGAAGGGTCGGAAGGAATCGGCGTGGACCAAGTATTTTGACCATGGAGGAGGAAGGGTTACTGCCTTGGAAACTGCAGAAGAATGGACAGTTGATCTTTCTAAGCTCTTTCTTGGGCTTAGGTTTGCTCATGGAGCTCATAGCCGACTCTATCGCGGTAACTATAAGGATGAACCTGTTGCCGTGAAACTTATTAGGATACCAGATGATGACGAAAGTGGAACCATGGCTGGTCGATTAGAGAAACAATTCATTAGAGAAGTCACTCTTTTATCTCGTCTCCACCATGAAAATGTTATAAAGTTTGTAGCAGCTTGCAGAAAACCCCCTGTTTATTGTGTAATCACAGAATTTCTGTCCGAAGGTTCCTTAAGGGCATATTTGCACAAGTTAGAGCACAAAGCTGTTCCTCTTGAAAAACTGATAGCTTTTGCTCTAGAAATTGCTCGTGGAATGAAATATATACACTCTCAAGGTATCATACATCGGGACCTTAAACCCGAGAATGTCCTTATCAGTGAAGATTCTCATCTCAAAATTGCTGATTTTGGCATTGCTTGTGAGGAGGCATACCGTGATGTATTCACTGATGACCCTGGTACATACCGTTGGATGGCCCCCGAGATGATAAAACGTAAATCCTATGGGAGAAAGGTTGACGTGTACAGTTTCGGGCTCATCCTATGGGAAATGGTGACCGGGACGATACCATATGAGGATATGACTCCCATCCAGGCTGCTTATGCTGTGGTAAATAAGAATTCAAGACCTGTTATTCCTTCAACCTGCCCATCTGCTATGCGAGCTTTAATTGACCAATGTTGGTCCTCGCATCCAGAGAAGAGGCCCGAGTTCTGGCAGATTGTCAAGATAATAGAACAATTTGAGTCGTCGCTTTCCCTTGATGGAACTCTGAAACTCCCGCAAAACTTTTGTTGCCAAGACCACAAGAAAGGACTTCTTCATTGGATTCAAAAGCTTGGTCCCGTGCATCAAAATAACGGCCCCGTGCCTAAACCGAAATTCACTTAA 1464 0.4495 MEEDSTSWIRRTKFSHTVCHRLDSSRLASIPLRIESEVGSGLKSRPTVSFNLNHIADAPKMHQNPNVKKPRSVSPLPETSLSDTFREAKHERKRFSTPGPRRKEHHEKRIMGKVSNKDSRDVKTPNLKSPSRSPILSSSKSSDSLKGRKESAWTKYFDHGGGRVTALETAEEWTVDLSKLFLGLRFAHGAHSRLYRGNYKDEPVAVKLIRIPDDDESGTMAGRLEKQFIREVTLLSRLHHENVIKFVAACRKPPVYCVITEFLSEGSLRAYLHKLEHKAVPLEKLIAFALEIARGMKYIHSQGIIHRDLKPENVLISEDSHLKIADFGIACEEAYRDVFTDDPGTYRWMAPEMIKRKSYGRKVDVYSFGLILWEMVTGTIPYEDMTPIQAAYAVVNKNSRPVIPSTCPSAMRALIDQCWSSHPEKRPEFWQIVKIIEQFESSLSLDGTLKLPQNFCCQDHKKGLLHWIQKLGPVHQNNGPVPKPKFT 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1744 487 Pfam Protein tyrosine and serine/threonine kinase 186 435 IPR001245 GO:0004672|GO:0006468
Lele16g1744 487 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 113 440 - -
Lele16g1744 487 Gene3D Phosphorylase Kinase; domain 1 168 263 - -
Lele16g1744 487 MobiDBLite consensus disorder prediction 57 145 - -
Lele16g1744 487 FunFam Serine/threonine-protein kinase isoform 1 170 264 - -
Lele16g1744 487 ProSitePatterns Serine/Threonine protein kinases active-site signature. 304 316 IPR008271 GO:0004672|GO:0006468
Lele16g1744 487 Gene3D Transferase(Phosphotransferase) domain 1 264 461 - -
Lele16g1744 487 SMART serkin_6 180 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele16g1744 487 SUPERFAMILY Protein kinase-like (PK-like) 164 435 IPR011009 -
Lele16g1744 487 MobiDBLite consensus disorder prediction 67 81 - -
Lele16g1744 487 ProSiteProfiles Protein kinase domain profile. 180 440 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele16g1744 487 CDD STKc_MAP3K-like 187 436 - -
Lele16g1744 487 PRINTS Tyrosine kinase catalytic domain signature 344 354 IPR001245 GO:0004672|GO:0006468
Lele16g1744 487 PRINTS Tyrosine kinase catalytic domain signature 298 316 IPR001245 GO:0004672|GO:0006468
Lele16g1744 487 PRINTS Tyrosine kinase catalytic domain signature 260 273 IPR001245 GO:0004672|GO:0006468
Lele16g1744 487 PRINTS Tyrosine kinase catalytic domain signature 363 385 IPR001245 GO:0004672|GO:0006468
Lele16g1744 487 PRINTS Tyrosine kinase catalytic domain signature 407 429 IPR001245 GO:0004672|GO:0006468
Lele16g1744 487 MobiDBLite consensus disorder prediction 83 125 - -
Lele16g1744 487 MobiDBLite consensus disorder prediction 126 142 - -
Lele16g1744 487 FunFam serine/threonine-protein kinase HT1 265 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1744 Lele-ChrLele16 10172055 10174563 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1744 1 487 MAP Kinase Kinase Kinase AT5G58950 57.116 0.0 597
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Lele16g1744 PK_Tyr_Ser-Thr 9.9e-64 CL0016