Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1737 ATGAATTGCTTCATTGTACGAACCGAACAGACAGCAAAATTTTCTGCAGGATTGCATGAGAAAATCGAACTAATCCCTCCCAATCAACTGTATTTTATTTGGAATTTCTCTTTTATTACTACATTCATTGTATCCTCAACCTTTGTCTTGGGCTGTGTTCCTTCACAGGGGAACCATAGTGACACTCTTGAACATTACTTTGGTGCATCTAAGATTTTAATCCAAAGTTCTGTTCCCAGAGGAATCATGCATTCTTTTGCATGGCACTGTCACTTGCCGCTTGGCTCCCTCTCTCACTCTTCTTTCTTCTTCTTAGTTCTTACGTTTCACCTTGAAAACCCCATTCGCCTTCCTTCTCTGATTCTCCCGATACCATTCGTTCTTCTTCCAGCTTTCAATTGCTTCACTGCTCTTCGTTTCCAGCTCTCGTTTCTGATCATGGCCTCTACTCTCCATTGGGACCCCGATAAAATGCTTCAACTATACATTCTGGATCATATGAAGAGAAGGGGAATGGATGAGACGGCTCAAATTTTCCAAACGGAATCAAATGTGATTGATGCTCCCGTTGTGATTCAGTCTCGAGAAGGATTCTTGCATGAATGGTGGTCCGTTTTCTATGACATATATACCTCAAGGAATCTGAAGCATCAGGAAATTGGGCCAGAAGCCACTAGTAATGTGGCGCTTCAAAAGACCGATAATGGAAGAAGAAATCTCCCTCCTAGAATCCCTCAGCTATCTAAGCAGAGATCTCAGCTGCTTCAAATCGACCCCACCATTAACAAGATGATGGAGCAACAGGCTGCCTGTGTGTTACCACCGGAAGTATATGAGAGAGAGTGTCTTGGATATCTAGCCGAAAATTCTGATCCAAGTTTACAACTTCTCAATGCAAAGACACTGAAGTTTGAGGATAGTGGAATTGGCATTCAGCTAGGAAGCAATATACCCACGGACCCCCTGGGTAAAGTACAAAGAGATATTTGGCCTTCAACTGGACCTCACGAAACAAGAGTTGATGAAGGTCTCAGTCTGGTGCCGCTAAATGGATATCCTTTAAATGTAGGTGATGGAGTATATATCGTGGAACCTTTTGAAGAAAAATTCCATTATGTATTCAGTTTGTTGAACAGTTTCTTGAAATGTAAAAGTTCGTGCCAAGATCCAAGGATTCCCCTGGTTGAAACTGATTTATGTAAAGATAGGCAGGACTGTATGAATGCAGCAGATGGTAGACCTGTGGGTAGAAACACTGGGCCTTTGTCTGATGAGAATGAAGATGCTGATCAAAGAACTGGACCTTCCAGGAATCTGAAACTTATTTTTGCAACATGTTTTTCATTTGAAGAGGTTGGTTGTCTTCACTCAAGCAAAAGCAAAGTTTTGTCCTGCCATTTTTCATCTGACGGGAAGTTTTTAGCAAGTGCTGGACATGAGAAGGAGGTTTTCGTTTGGAATATGGAAAATTTTGATTGTGTTAGTACTTCAGATGCACATTCACTTCTCATTACTGATGTTCGGTTCAGACCAGGCTCAACCATATTTGCAACATCTTCTGCTGATAAAACTGTAAAAATATGGGATGCGGCCAAAGCAAACAAATCATTGTTTGAGCTTCCCGGGCATGCTGAACAAGTAATGTCATTGGACTTCCACCCAAGAAAGGTGGACCTTCTTTGTTCCTGTGATAGCAATGGTATAATGCGATTGTGGAATGTCAACCAAGGCGTATGTGTGCGTATAAATAAGGGAGGCAGTAAACAAGTCAGGTTCCAGCCTCAAATTGCCAACTTTTTGGCTGCTGCTGCAGGAAATATTATTAATGTAATTGATATTGAGGGTGACCAACTCATATACAAGCTGAAGGGACATCTTAAAGATGTTATTTCCATTTGTTGGGACGTAGCAGGAAACTATCTTGCTTCTGTAAGTGAAGATAGTGCACGTGTGTGGTCCGTCACATCTGATGGAAAATGCATACAAGTCTTGCATTCAAATGGAGACAAGTTTCAATCGTGCATATTTCATCCTGTATTTTATAACCTCTTAATCATTGGTTGCAATCAGTCCCTGGAATTTTGGATTCCAACAGAGGGCTGTAAAATATGGACTCATCCTGCTCACAAGGAAGTAATCGCTGGACTTGGAGCTTCACCAGAAAATCAAATGGTTGCCTCAGCTAGCCATGATCATACCGTGAAACTTTGGAAATAA 2217 0.4145 MNCFIVRTEQTAKFSAGLHEKIELIPPNQLYFIWNFSFITTFIVSSTFVLGCVPSQGNHSDTLEHYFGASKILIQSSVPRGIMHSFAWHCHLPLGSLSHSSFFFLVLTFHLENPIRLPSLILPIPFVLLPAFNCFTALRFQLSFLIMASTLHWDPDKMLQLYILDHMKRRGMDETAQIFQTESNVIDAPVVIQSREGFLHEWWSVFYDIYTSRNLKHQEIGPEATSNVALQKTDNGRRNLPPRIPQLSKQRSQLLQIDPTINKMMEQQAACVLPPEVYERECLGYLAENSDPSLQLLNAKTLKFEDSGIGIQLGSNIPTDPLGKVQRDIWPSTGPHETRVDEGLSLVPLNGYPLNVGDGVYIVEPFEEKFHYVFSLLNSFLKCKSSCQDPRIPLVETDLCKDRQDCMNAADGRPVGRNTGPLSDENEDADQRTGPSRNLKLIFATCFSFEEVGCLHSSKSKVLSCHFSSDGKFLASAGHEKEVFVWNMENFDCVSTSDAHSLLITDVRFRPGSTIFATSSADKTVKIWDAAKANKSLFELPGHAEQVMSLDFHPRKVDLLCSCDSNGIMRLWNVNQGVCVRINKGGSKQVRFQPQIANFLAAAAGNIINVIDIEGDQLIYKLKGHLKDVISICWDVAGNYLASVSEDSARVWSVTSDGKCIQVLHSNGDKFQSCIFHPVFYNLLIIGCNQSLEFWIPTEGCKIWTHPAHKEVIAGLGASPENQMVASASHDHTVKLWK 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1737 738 ProSiteProfiles Trp-Asp (WD) repeats profile. 706 738 IPR001680 GO:0005515
Lele16g1737 738 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 706 738 - -
Lele16g1737 738 Gene3D - 586 738 IPR015943 GO:0005515
Lele16g1737 738 SMART Lish 155 187 IPR006594 GO:0005515
Lele16g1737 738 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 540 577 - -
Lele16g1737 738 PANTHER TRANSCRIPTIONAL REGULATOR OF FILAMENTOUS GROWTH FLO8 147 738 IPR044716 GO:0003714
Lele16g1737 738 SMART WD40_4 657 696 IPR001680 GO:0005515
Lele16g1737 738 SMART WD40_4 615 653 IPR001680 GO:0005515
Lele16g1737 738 SMART WD40_4 699 738 IPR001680 GO:0005515
Lele16g1737 738 SMART WD40_4 490 529 IPR001680 GO:0005515
Lele16g1737 738 SMART WD40_4 448 487 IPR001680 GO:0005515
Lele16g1737 738 SMART WD40_4 533 573 IPR001680 GO:0005515
Lele16g1737 738 ProSitePatterns Trp-Asp (WD) repeats signature. 560 574 IPR019775 -
Lele16g1737 738 SUPERFAMILY WD40 repeat-like 447 738 IPR036322 GO:0005515
Lele16g1737 738 PRINTS G protein beta WD-40 repeat signature 725 738 IPR020472 -
Lele16g1737 738 PRINTS G protein beta WD-40 repeat signature 474 488 IPR020472 -
Lele16g1737 738 PRINTS G protein beta WD-40 repeat signature 516 530 IPR020472 -
Lele16g1737 738 MobiDBLite consensus disorder prediction 410 433 - -
Lele16g1737 738 ProSiteProfiles Trp-Asp (WD) repeats profile. 497 529 IPR001680 GO:0005515
Lele16g1737 738 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 497 529 - -
Lele16g1737 738 Gene3D - 429 585 IPR015943 GO:0005515
Lele16g1737 738 ProSiteProfiles Trp-Asp (WD) repeats profile. 540 582 IPR001680 GO:0005515
Lele16g1737 738 ProSiteProfiles Trp-Asp (WD) repeats profile. 455 496 IPR001680 GO:0005515
Lele16g1737 738 CDD WD40 451 738 - -
Lele16g1737 738 ProSiteProfiles LIS1 homology (LisH) motif profile. 155 187 IPR006594 GO:0005515
Lele16g1737 738 Pfam WD domain, G-beta repeat 456 487 IPR001680 GO:0005515
Lele16g1737 738 Pfam WD domain, G-beta repeat 536 573 IPR001680 GO:0005515
Lele16g1737 738 Pfam WD domain, G-beta repeat 492 529 IPR001680 GO:0005515
Lele16g1737 738 Pfam WD domain, G-beta repeat 703 738 IPR001680 GO:0005515
Lele16g1737 738 Pfam WD domain, G-beta repeat 617 653 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1737 Lele-ChrLele16 10111559 10119797 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1737 499 719 Miscellaneous Gene Families AT5G08390 25.941 4.05e-14 74.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR LUG Lele16g1737 WD40 0.004 CL0186