Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1735 ATGAACGGTAAGCCTCAGGCTCAGCAACCCCAGAAATGTCCTCGGTGTGATTCTCTCAACACCAAGTTCTGTTACTACAACAACTATAGCCTCTCGCAGCCTCGTTACTTTTGCAAGGCGTGTCGAAGGTACTGGACCCAAGGTGGAACCTTGAGGAACGTCCGCGTCGGCGGTGGCTGTCGCAAGCCCAAGCGGAGTAAAGGCTCGGCTTCTTCCTCTTCGTCTTCCACAGACACTAGTTCTGCCCCGTCGTTGTTACAGCCGCCGCGAGAGGCAGCGGAGGTACAGAAGGACCCTTCCGCCGCGAGTTCTGCTTCTTCTACTACTGTGGCGGTTCCGTCAATCAGCCCCTTTTATCAAGGCGGTGCATGTGGGGATGTTGGTGGGTGTTTGTCGTCTCTGGCAGCGATTCAATCGCCGTTCAATCAGATGGGTTCTTGTTCTAATTTGAGTCTTCTTTCTGGGTTCGGTGCTCCTATCCGTCCGTCGTCGCAACCATTTTATCAGATGGGTGTTATCAGAGACAAGGAAGAAGAGAATCTGCAGTATGAAGCAGACCAAGTTTTGATTCAGTCAAGCACGGCCAATAGCGGTTCTGCTTCAGCTCACCCCCCTGATTGGACTGAAAGCTTCATCAATAACGTTAACCAGAGGGGATCCGATGCCTCTCTGTGGAGCACCACCATGAGTACCACTTCCACTAGTGGAAATTCTCAGAGTCATAATAATAATGATTCTGTTGGTGGGTCATTTTCTTTGATCCCAAATCACCAGTGGCCTGATCTTTCTGAGTATGACCCTCCTCCTCCATGA 813 0.5105 MNGKPQAQQPQKCPRCDSLNTKFCYYNNYSLSQPRYFCKACRRYWTQGGTLRNVRVGGGCRKPKRSKGSASSSSSSTDTSSAPSLLQPPREAAEVQKDPSAASSASSTTVAVPSISPFYQGGACGDVGGCLSSLAAIQSPFNQMGSCSNLSLLSGFGAPIRPSSQPFYQMGVIRDKEEENLQYEADQVLIQSSTANSGSASAHPPDWTESFINNVNQRGSDASLWSTTMSTTSTSGNSQSHNNNDSVGGSFSLIPNHQWPDLSEYDPPPP 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1735 270 MobiDBLite consensus disorder prediction 226 270 - -
Lele16g1735 270 MobiDBLite consensus disorder prediction 56 108 - -
Lele16g1735 270 MobiDBLite consensus disorder prediction 66 86 - -
Lele16g1735 270 ProSiteProfiles Zinc finger Dof-type profile. 11 65 IPR003851 GO:0003677|GO:0006355
Lele16g1735 270 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 4 230 IPR045174 GO:0003700|GO:0006355
Lele16g1735 270 ProSitePatterns Zinc finger Dof-type signature. 13 49 IPR003851 GO:0003677|GO:0006355
Lele16g1735 270 Pfam Dof domain, zinc finger 9 65 IPR003851 GO:0003677|GO:0006355
Lele16g1735 270 MobiDBLite consensus disorder prediction 226 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1735 Lele-ChrLele16 10100575 10101387 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1735 1 139 C2C2-Dof Transcription Factor Family AT4G21050 47.857 2.71e-33 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele16g1735 zf-Dof 1.8e-31 No_clan