Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1733 ATGGAAAGAAGCGGATCAGAGGGAAAGAGGAGCTTCAAGTACAAGGTGGTGGCGGAGGAGCAGGAGGAGGTTGAGGATGAGGAAGAAGATGAACAAGTTGATGAGTTCAATTTAGGAGGAGACGATGGGAGGAATAAGAAGATGAGAGATCTGTATAACAGCAATAGGGGAGGGTCTTCTTCATCAATGGCTCCTTCATGTCAGGTTGAAAGCTGTGACAGTGATCTGAGTGAGGCTAAGCACTACCATCGCCGCCATAAGGTTTGTGAGTTCCATGCCAAAGCTGCTTCTGTGCTCATTTCCGGCTTGCACCAAAGGTTTTGCCAACAATGCAGCAGGTTTCATGAGCTGGGAGAATTTGATGACACCAAGAGGAGCTGTAGAAAGCGTTTGGCTGGACACAATGAAAGGCGTCGAAAGAATGCATCTTAA 432 0.4745 MERSGSEGKRSFKYKVVAEEQEEVEDEEEDEQVDEFNLGGDDGRNKKMRDLYNSNRGGSSSSMAPSCQVESCDSDLSEAKHYHRRHKVCEFHAKAASVLISGLHQRFCQQCSRFHELGEFDDTKRSCRKRLAGHNERRRKNAS 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1733 143 MobiDBLite consensus disorder prediction 1 67 - -
Lele16g1733 143 SUPERFAMILY SBT domain 65 141 IPR036893 GO:0003677|GO:0005634
Lele16g1733 143 MobiDBLite consensus disorder prediction 52 67 - -
Lele16g1733 143 MobiDBLite consensus disorder prediction 21 36 - -
Lele16g1733 143 Pfam SBP domain 67 140 IPR004333 GO:0003677
Lele16g1733 143 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 43 142 IPR044817 GO:0003677
Lele16g1733 143 MobiDBLite consensus disorder prediction 1 20 - -
Lele16g1733 143 FunFam Squamosa promoter-binding-like protein 14 58 128 - -
Lele16g1733 143 Gene3D - 57 128 IPR036893 GO:0003677|GO:0005634
Lele16g1733 143 ProSiteProfiles Zinc finger SBP-type profile. 64 141 IPR004333 GO:0003677
Lele16g1733 143 MobiDBLite consensus disorder prediction 37 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1733 Lele-ChrLele16 10076499 10078025 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1733 58 143 SBP-box Gene Family AT2G33810 70.930 2.80e-42 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Lele16g1733 SBP 9.7e-33 No_clan