Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1709 ATGGAGGCCGAGTCTGTTTCAGACGGGGAGAACAATCGGAAAAGGGATGCCGCTGATGATTACAATGACAACAATAATGGAAGTAACAAAAAAATTGTAAATTCCAATGAAGGGCAGAGCAAGCCCAAGCGTCAGATGAAGACTCCTTTCCAGCTTGACGCCCTAGAGAAAGCTTATGCTTTGGAGACGTACCCGTCGGAGGCGATGAGGGCAGAACTGTCGCAGAAGTTGGGGCTGTCGGATCGGCAATTGCAAATGTGGTTCTGCCATAGGAGGTTGAAAGACAAGAAGGACGTGCCTAAGTCTTCAAGAAAGGCTCCACCGCATTTGCCCGCTTCACCGACGGACGACTTGAGGATGGAGACTGAACTTGCCAATGATTATGGATCCGGGTCGGGTTCGGGCTCAAGCCCGTTCACGCGTTCAGAGATGAGGAATGTAGTACCTAGGGGTGTTCCTGGGTACTATGAGTCACAGCAGGCTCTTACGGAGCTCAGAGCAATTGCTTGTGTGGAGGCACAATTAGGAGAACCCTTAAGGGAGGATGGACCTATTTTAGGAGTTGAGTTTGATCCATTGCCGCCAGATGCATTTGGAGCACCTATAGCAGTTACTGAGCAGCAGAAGCGGCCTAGTATTGTCTTTGATAGTAAAGTCTATGAAAGACATGACGTTAGATCAAATAAGGCTATGACAAGGACTTTCCATGAATGTCCATTTCTCCCAAACCACTCCAGTATTAGGTCTGATGCTTATGGACAATTGACACAATCTCATTTACTTGATCCGATGGATGGTCCAGCAAGAACTCCATCTTTTATAGTAAAAAATGAACAGCTTCCCAGGCTTCATGCTGCCCAAGGTCATTTGTCACGTGCTCGTGGTTCATCTTTACATGATAAGCAAGGTCTTCCATTTCCATCACCCCCTCGTGATGATGATGGCCACTCTCAAAGGGAATCTTACACAAAGCTAAATATTGGAATGAACTCTCACTTTACTGATATCCCTATTGTTGGACCAGAAAACCCTTATGCTGTAGTGGGTGGACAAGTTTTCCATGGCGATGCAATATTACGGGTGGACAGGAAACGAAAGAGCGATGATTCTAGAGCTGCAAGAGAAGCTGAAGCCCATGAGATTAGGATCCAGAAGGAGATGGAGAAACAAGATAACATTAGGCGAAAGAATGAAGAAAGAATAAGGAAAGAGATGGAGAGGCAAGATCGTGAACGAAGGAAGGAAGAAGAGAGGTTGATGCGTGAGAGACAAAGAGAGGAAGAAAGAACAAAGCGTGAAATCGAACGGAAGGAAAAGTTTCTGATGAAAGAAAATTTAAGAGCTGAGAAAAGGAGGCAAAAAGAAGAGCTTCGAAAAGAGAAAGAAGCAGAGAGAAGGAAAGCTGCTCTTGAGAAGGCAGTTGCCCGCAGAATAGCTAAAGAATCTATGGAGCTTATTGAGGATGAACAACTGGAATTGATGGAGTTGGCTGTGGCAAGCAAGGGACTTCCCTCAATTATAAATCTTGATCTTGACACTTTGCAAAACCTTGATATGTTTGGGGATTCATTATGCATTTTTCCACCTAAGAGTTTAAAGCTGAAAAAACCATTTGCCATCCAACCCTGGATCAAATCTGAGGAGCATGTTGGCAACCTTCTCATGGTTTGGAGATTTCTGATTACATTTGCAGATGTCCTCGAGTTGTGGCCTTTTACTCTTGATGAGTTTTTGCAGGCATTTCATGACTATGATTCAAGATTATTTGGTGAGATACATGTTGCTCTTCTCAAGGTGATAATAAAGGACATCGAAGATGTTGCAAGGATGCCTACAGGATTAGGTACAAACCAGAATGGGGCTGCTAATCCTGGGGGTGGCCATCCAGAGATTGTGGAAGGGGCATATGCATGGGGCTTTGATATAAGAAATTGGCAGAAGCACTTGAATCAATCAACATGGCCAGAAATTTTCCGACAGTTAGCATTGTCTGCAGGGTTTGGACCACGGTTGAAGAAAAGAAATATCACATGGTCATATGCAAATAATAAAGATGAGGGTAGAAGTTGTGAAGACATCATCTCCACACTTCGCAATGGTTCAGCAGCTGAAAATGCAGTGGCAAAAATGCAAGAGAAAGGTCTATTAGCCCCTCGGAGAAATAGGCACCGGTTGACTCCTGGAACAGTCAAGTTTGCCGCATTTCATGTTTTGTCTCTTGAGGGTAGCAAGGGGTTGACAGTACTAGAGCTTGCAGAGAAAATTCAGAAATCTGGACTTCGGGACCTGACAACCAGCAAGACTCCTGAGGCATCCATTTCTGTTGCTTTGACTAGAGATGCTAAACTTTTTGAAAGAATAGCTCCCTCAACATATCGAGTTCGTGCTGCATACAGAAAAGATCCTGCGGACACGGAGGCCATTCTTTCAGATGCTAGAAAGAAAATTCAGATATTTGAAAATGGGTTTCCTGCTGTTGAAGATGCTGATGATGTTGAAAGAGAAGAAGAGTCAGAAAGTGATGAAGTTGATGAGGATCCTGAAGTAGATGATTTAGTAAATCCCCTAAGTGATAACAAAACATCTGAACAGTATGATGACCTGAACAATTGCTCTACAAATGGAAGAGAGAATATGAGCCATGACATGGAACTTATTCAAAATGAGTTTGGCAAGGATCTTCCTTGTGTTCCTGAGAATTGTTCCAAGGATGCTGATTGCCCAAGTGCCATCACCGGACAACGGGTTGTTGTTGAAGATTTGAATACTGGAAATCCTGAAGATAATATGGAAATTGATGAAAGCAAGTCTGGAGAATCATGGGTTCAAGGTCTTACAGAAGGAGAATATTCTGACCTTAGTGTAGAAGAACGTCTCAATGCTCTAGTAGCATTAGTTGGTGTTGCAAATGAAGGGAATTCAATACGTCTTGTTCTTGAGGACCGTTTGGAGGCAGCAAATGCTCTGAAGAAGCAAATGTGGGCAGAAGCACAAATAGATAAAGTTCGGCAGAAAGATGATAATTCTAATAAATTAGATTTTCCATCTCTTACTGCAAATAAAGTTGAGACACAATATACAGGCCCTGCTGCAGAGGGAAACCAGAGCCCGTTGCTTGACATCAATATTACTAATAATGAGGCATCACCCAACACTGCAGAAAATCAAAAAGAAGTTCTTGGCTCACAGGACACGCCTATTGAAAAGCCCTCAGTTGTTCAAGATCTCTTTGTAGGTCCAGACAACCTACAGATTCTATCTGCACACGCTTCTAAAAGGTCTCGTTCACAGTTGAAGTCCTATATTGCACATATAGCAGAAGAGATGTATGTATATAGGTCCTTGCCCCTTGGTCAAGATCGGAGACGTAACCGTTATTGGCAATTCGTTGCATCTGCTTCCAGCAGTGATCCTGGTGCTGGCAGGGTCTTTGTTGAATTACATGACGGCAGTTGGAGGCTTATTGATTCTGAAGAGGACTTTGATGCACTTTTGACATCCCTTGATTCACGTGGAATTAGGGAATCTCATTTACGCTTAATGTTGCAGAAGATTGAGAATTCCTTCAAGGAAAATGTTCGAAAGAATGCTCAATTTAATAAAATTGCTACAAAATCAATTAAAAATGAAGCCGATGAAATAGAATTGGCTCCTGAATGCCGTGCTGGATCAGACAGTTCTAGCAGTACACTTTGTGGTTTGAATTCTGATAGTACATTGGAAACTTCGTCATCCTACAAAATTGAGCTGGGGAGAAGGGAGAGTGAAAAAAAAGCCGCCTTGACCAAGTATCAAGATGTTCAAAAGTGGTTATGGAAAGAATGTTATAATTCATCCACATTATATTCAATGAAATATGGGCAAAGGAGATGCAAGCCCCTGCTGGAAATATGTGATATGTGTTTGAATCCATATTTCTTTGAAGATTACCATTGTAATTCTTGCCACCATAGTTTTGCCGCTAATAATGGATTTAATATTTCTAAACATCCATTTCAATGTGGAGAGAGGTTAGATTCCAGAGGTATTTGCACTTGGGATTCTTCTCTTCCCTTGCGGATAAGGTTGCTCAAGGCCTTGTTGGCTTGTATTGAGGCTTCTGTTCCTCTTGAAGCATTACAATCAATTTGGACAGAAGAGAATAGGAAGCAGTGGGGTGTGAAGTTGAGCAAATCATCTACAACTGATGAACTCTTGCAGTTATTGACCTTGTTGGAGAGAGCAGTACAGCTGGACTTTCTGTCATCAAACTTCTCTACAACAGAAGAAATGTTGGGATCAAATTGTGAGCCAGATAATGCTGCAAATGCTTCTACTGATGCTGAATCAGTTCCTGTGCTGCCATGGGTACCACAAACCACTGCAGCTATGTCATTGAGAATCTTTGAATTTGATGCATCCGTAAGTTACATACCGGCTGAGAAACCTGAGCTACCTTGCGAGGAGAAAGAAGCGAGGGAATACGTGAAGCTTCCTTCAAGATATGCTCTCTTCAAATCTGGCAGAGCTATTGAATCAGCAGAATTAGGCCATGGTGAATTCATCAAGGAAGACAAATCTTATAAAAGTGCTCGAGGCTGCAATAAACGTGGACGAGGTTCTCATGATCATGGGCAGGGCAAAAAGTTGTCTAGAAGAACACAAGAGCCAAAACAACATTTGGGGCGTCGAAATGTTAAAGGCGCTGAGAATATAGGTCAAGGATTAAAACAGCAGGGGAGAGGGGCACAAGGACAACCCGGTGGACGTGGTCGCCGGACGGTCAGGAAAAGAAGAGCGGAGAAGAGGGCTGTCGTTGAGGGCTTATTGCAGGGCTACAAGGGTGTTTGTCGTAGTCCCAAAATTAGTAGAGAATCATTGAGAAGTATGGAAGAAGAGGAATGGGATGGCGAGAAGGAATCAAGTCCCATCCAAATGGATGATGTTGATAATAGTAACAGTGCTGAGGAAGTGGAATCAGATGACAATGGGCAAGCAGTGGAGTATGAGCAAGGAAACTGGGAGGTAGGTTTCAATGGTGATAGTTCCAACAGATGGGATAGGGCTTTGGTCGGAGCGAGCGATGAAGAAGAAGCGGTGGGTGCTTCTGAAGATGACAATGGTGTTGAAGAGGGAGAAGAGGAGTTGGAAGAAGGTTCAGAAGAGGTCATGAGTGAGGGAGAGGATTCGGATGGTATGGGCAATAGAATGATGGTAAATGAAGAAGGCGGCTCAGACTCAGCTGTCTCTGAGGATTCTTCTGATTAA 5247 0.4326 MEAESVSDGENNRKRDAADDYNDNNNGSNKKIVNSNEGQSKPKRQMKTPFQLDALEKAYALETYPSEAMRAELSQKLGLSDRQLQMWFCHRRLKDKKDVPKSSRKAPPHLPASPTDDLRMETELANDYGSGSGSGSSPFTRSEMRNVVPRGVPGYYESQQALTELRAIACVEAQLGEPLREDGPILGVEFDPLPPDAFGAPIAVTEQQKRPSIVFDSKVYERHDVRSNKAMTRTFHECPFLPNHSSIRSDAYGQLTQSHLLDPMDGPARTPSFIVKNEQLPRLHAAQGHLSRARGSSLHDKQGLPFPSPPRDDDGHSQRESYTKLNIGMNSHFTDIPIVGPENPYAVVGGQVFHGDAILRVDRKRKSDDSRAAREAEAHEIRIQKEMEKQDNIRRKNEERIRKEMERQDRERRKEEERLMRERQREEERTKREIERKEKFLMKENLRAEKRRQKEELRKEKEAERRKAALEKAVARRIAKESMELIEDEQLELMELAVASKGLPSIINLDLDTLQNLDMFGDSLCIFPPKSLKLKKPFAIQPWIKSEEHVGNLLMVWRFLITFADVLELWPFTLDEFLQAFHDYDSRLFGEIHVALLKVIIKDIEDVARMPTGLGTNQNGAANPGGGHPEIVEGAYAWGFDIRNWQKHLNQSTWPEIFRQLALSAGFGPRLKKRNITWSYANNKDEGRSCEDIISTLRNGSAAENAVAKMQEKGLLAPRRNRHRLTPGTVKFAAFHVLSLEGSKGLTVLELAEKIQKSGLRDLTTSKTPEASISVALTRDAKLFERIAPSTYRVRAAYRKDPADTEAILSDARKKIQIFENGFPAVEDADDVEREEESESDEVDEDPEVDDLVNPLSDNKTSEQYDDLNNCSTNGRENMSHDMELIQNEFGKDLPCVPENCSKDADCPSAITGQRVVVEDLNTGNPEDNMEIDESKSGESWVQGLTEGEYSDLSVEERLNALVALVGVANEGNSIRLVLEDRLEAANALKKQMWAEAQIDKVRQKDDNSNKLDFPSLTANKVETQYTGPAAEGNQSPLLDINITNNEASPNTAENQKEVLGSQDTPIEKPSVVQDLFVGPDNLQILSAHASKRSRSQLKSYIAHIAEEMYVYRSLPLGQDRRRNRYWQFVASASSSDPGAGRVFVELHDGSWRLIDSEEDFDALLTSLDSRGIRESHLRLMLQKIENSFKENVRKNAQFNKIATKSIKNEADEIELAPECRAGSDSSSSTLCGLNSDSTLETSSSYKIELGRRESEKKAALTKYQDVQKWLWKECYNSSTLYSMKYGQRRCKPLLEICDMCLNPYFFEDYHCNSCHHSFAANNGFNISKHPFQCGERLDSRGICTWDSSLPLRIRLLKALLACIEASVPLEALQSIWTEENRKQWGVKLSKSSTTDELLQLLTLLERAVQLDFLSSNFSTTEEMLGSNCEPDNAANASTDAESVPVLPWVPQTTAAMSLRIFEFDASVSYIPAEKPELPCEEKEAREYVKLPSRYALFKSGRAIESAELGHGEFIKEDKSYKSARGCNKRGRGSHDHGQGKKLSRRTQEPKQHLGRRNVKGAENIGQGLKQQGRGAQGQPGGRGRRTVRKRRAEKRAVVEGLLQGYKGVCRSPKISRESLRSMEEEEWDGEKESSPIQMDDVDNSNSAEEVESDDNGQAVEYEQGNWEVGFNGDSSNRWDRALVGASDEEEAVGASEDDNGVEEGEEELEEGSEEVMSEGEDSDGMGNRMMVNEEGGSDSAVSEDSSD 1748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1709 1748 MobiDBLite consensus disorder prediction 855 870 - -
Lele16g1709 1748 MobiDBLite consensus disorder prediction 1 50 - -
Lele16g1709 1748 MobiDBLite consensus disorder prediction 1691 1721 - -
Lele16g1709 1748 SUPERFAMILY Homeodomain-like 31 97 IPR009057 -
Lele16g1709 1748 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 937 977 IPR028942 -
Lele16g1709 1748 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 1113 1185 IPR028941 -
Lele16g1709 1748 MobiDBLite consensus disorder prediction 1042 1065 - -
Lele16g1709 1748 MobiDBLite consensus disorder prediction 22 46 - -
Lele16g1709 1748 MobiDBLite consensus disorder prediction 1042 1062 - -
Lele16g1709 1748 Pfam DDT domain 548 603 IPR018501 -
Lele16g1709 1748 Gene3D - 25 100 - -
Lele16g1709 1748 MobiDBLite consensus disorder prediction 1521 1558 - -
Lele16g1709 1748 Pfam Homeodomain 41 97 IPR001356 GO:0003677
Lele16g1709 1748 ProSiteProfiles DDT domain profile. 547 606 IPR018501 -
Lele16g1709 1748 MobiDBLite consensus disorder prediction 829 852 - -
Lele16g1709 1748 MobiDBLite consensus disorder prediction 825 870 - -
Lele16g1709 1748 Coils Coil 376 396 - -
Lele16g1709 1748 MobiDBLite consensus disorder prediction 1617 1638 - -
Lele16g1709 1748 ProSiteProfiles HARE-type HTH domain profile. 728 797 IPR007759 GO:0006355
Lele16g1709 1748 MobiDBLite consensus disorder prediction 1610 1748 - -
Lele16g1709 1748 Pfam HB1, ASXL, restriction endonuclease HTH domain 728 796 IPR007759 GO:0006355
Lele16g1709 1748 SMART testlast3 547 606 IPR018501 -
Lele16g1709 1748 ProSiteProfiles 'Homeobox' domain profile. 38 98 IPR001356 GO:0003677
Lele16g1709 1748 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 20 1748 IPR044977 GO:0006357
Lele16g1709 1748 MobiDBLite consensus disorder prediction 96 118 - -
Lele16g1709 1748 MobiDBLite consensus disorder prediction 390 432 - -
Lele16g1709 1748 MobiDBLite consensus disorder prediction 285 319 - -
Lele16g1709 1748 MobiDBLite consensus disorder prediction 1521 1596 - -
Lele16g1709 1748 MobiDBLite consensus disorder prediction 1 21 - -
Lele16g1709 1748 CDD homeodomain 43 97 IPR001356 GO:0003677
Lele16g1709 1748 SMART HOX_1 40 102 IPR001356 GO:0003677
Lele16g1709 1748 Coils Coil 398 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1709 Lele-ChrLele16 9943797 9952800 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1709 7 1674 Homeobox Transcription Factor Family AT1G28420 49.257 0.0 1353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Lele16g1709 WSD 1.6e-14 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g0812 13 19865545 19865997 Lele16g1709 16 9943797 9952800 CCT
Lele14g0703 14 18251604 18252068 Lele16g1709 16 9943797 9952800 CCT
Lele15g1667 15 9927438 9927878 Lele16g1709 16 9943797 9952800 CCT
Lele16g1703 16 9888867 9889331 Lele16g1709 16 9943797 9952800 CCT
Lele16g1709 16 9943797 9952800 Lele13g0801 13 19798710 19799635 CCT
Lele16g1709 16 9943797 9952800 Lele14g0691 14 18168855 18171090 CCT
Lele16g1709 16 9943797 9952800 Lele15g1678 15 9997347 9998297 CCT
Lele16g1709 16 9943797 9952800 Lele16g1714 16 9981296 9984081 CCT
Lele16g1709 16 9943797 9952800 Lele16g1709 16 9943797 9952800 ECH
Lele13g0807 13 19825420 19834510 Lele16g1709 16 9943797 9952800 hybridization
Lele14g0697 14 18197049 18205890 Lele16g1709 16 9943797 9952800 hybridization