Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1706 ATGCTTCCCCTGTTCTTGCTGCTCTGTTTTCTCTTCCCACCTCCCGCTGTTGTCTCTCTCAACCAGGATGGTCTTTATCTCTACAAATTCAAGCTCTCGATGACTGATGCTGACTCTTCCCTATCCTCCTGGAACGACGGCGACGCCCACCCCTGCTCATGGTCCGGCGTCACTTGCGACTCCACCAACACCTCCGTCACTGAGCTTGACCTCTCCAGCTCCAATATCGCCGGCCCATTCTCCGCTTCCATTCTCTGCGACCTAACCAACCTCACTACCCTCATCCTCTACAATAACTCCATCAACGACGCCCTTCACTCCGAAATTGCTCTCTGTCGCAGCCTCGTTCATGTTGACCTCTCCCAGAACCTTCTTACCGGTGCTCTGCCCCCCACCTTGTCGGATCTTCCTAACCTCCGGTATCTGGACTTGACCGGCAACAACTTCTCCGGCCTCATACCCGATTCCTTTGCCAACTTTCAGAAGCTTGAGGTACTCTCACTCGTCTACAATCTCCTAGACGGAACAATACCTGCTTCTCTCGGAAACATTACCACCCTCAAGATGCTCAACCTCTCTTACAACCCGTTTTCACCGGGTCGGATCCCTCCGGAGCTCGGCAACCTGGCGAATCTCGAGGTCATGTGGCTCACACAGTGTAACTTGGTCGGCGTGATTCCTGAATCGTTCGGCAAGCTGAAGAAACTCAGGGATTTAGACCTGGCGTTGAACAATCTGGATGGTCCGATTCCCAGTTCCTTCATTGAGATGACGAGTTTGGAGCAGATTGAGCTGTATAACAACTCGTTGTCCGGTGAGTTGCCTCGGGGAATGGGAAACCTCACGGCATTGAGGCTAGTCGACGTAGCCATGAACCAGTTGAGTGGGACGATCCCAGACGAGTTGTGTCGGCTACCATTGGAGAGCCTTAACCTTTACCAGAATCAATTTGAGGGAGAGTTGCCGGCGAGCATAGCCAACTCACCGAATCTTTATGAACTCAGATTGTTTGCTAACAAACTGACCGGTAAACTGCCTAGTATTCTCGGGAAGAATGCTCCTTTGAGGTGGGTCGACGTTTCGGACAATCAATTCAGGGGCCAAATTCCGGCGACTCTGTGTGACAACGGTAAATTGGAAGAGCTTCTGATGATATACAACTCGCTATCCGGTAATATCCCGGCGAGCTTTGGCAGATGTCGGAGTTTGATGCGGGTCCGGCTCGGTTTCAATCGGTTGTCCGGTGAAGTCCCGGCGGCTCTTTGGGGGCTTCCACATGTGTATCTGCTTGAACTTACTGATAACTCATTTTCTGGACCAATCGCTAAAACTATTGCTGGCGCCGGGAACCTCTCCTTGTTGACTTTATCTAAGAACAATTTCACCGGACCGATACCTGAAGAGATTGGGTGGCTCGAGAACCTTGAGGAATTCTCTGGTAATGATAACATGTTCAATGGATCATTGCCTGCTAGCATAGTGAATCTTGGGCAGCTTGGGACTCTTGATCTTCACAACAATAAACTTTCAGGCGAACTCCCAATGGGAATTCGATCGTGGAAGAAACTCAATGAGCTTAATCTGGCAAATAATGAGATGGGTGGGAATATTCCTGAAGAAATTGGGAGTTTGTCCGTGCTAAATTTTCTTGATCTTTCCAAGAATCAGTTTTCTGGCAAAGTTCCTGCTGAATTGCAGAATTTGAAGCTCAATAGGTTAAATATGTCTTACAATCATCTCTCAGGAGAACTTCCTGCAATTTTGGCTAAGGATATGTACACGACAAGTTTTCTGGGTAATCCTGGTTTGTGTGGGGATTGGAACAGTTTGTGTAATGGCAGAGATGAAGCTAAGGCAACAGGGTATTCTTGGTTACTCCGAATTATTTTCATCATTGCCACCGCTGTCTTTGTCGTAGGTGTGGTCTGGTTTTATTTCAAGTACAAGAACTTCAAAAAGGCAAAAAGAGCCATTGACAAATCAAAATGGACATTGATGTCATTCCATAAACTGGGTTTCGGTGAAGATGAAATCCTGAATTGCCTTGATGATGACAGTGTCATAGGAAGTGGATCATCTGGGAAAGTGTACAAGGTTGTTCTTAGCAGCGGCGAGGCTGTCGCGGTAAAGAAGCTTTGGGGAGGCGTAAAAAAGGAAATGGACAGTGAGGATATTGAAAAAGGCGGTGTACAAGACAATGCTTTTGATGCCGAAGTTGAAACCTTGGGTAAAATTAGGCACAAAAACATAGTGAAGCTTTGGTGTTGTTGCACCACAAGAGACTGCAAGCTCCTAGTTTACGAGTACATGCCGAACGGTAGCCTTGGCGATTCGCTTCATGGAAGTAAAGGTGGCTTGTTGGACTGGCCAACAAGGTATAAGATAGCCCTTGATGCTGCAGAAGGTCTCTCTTATCTGCATCATGATTGTGTTCCCCCAATTGTTCATAGAGATGTAAAATCTAACAACATCCTGTTGGATGGCGACTTTGGCGCGAGGGTGGCTGATTTCGGCGTAGCCAAGGTTGTCGAAACCAACGGGAAAGGAACCAAATCCATGTCTGTCATTGCTGGCTCTTGTGGATACATTGCACCAGAATATGCATACACACTGAGGGTGAATGAGAAGAGCGACATATATAGCTTCGGCGTGGTGATACTCGAGTTGGTGACAGGAAGACGGCCGGTAGACCCGGAGTTTGGGGAAAAGGATTTGGTGAGGTGGGTTTACAGCACCTTGGACCAGAAAAGAGTGGAGCACGTGATCGACTCGAGGCTGGATCCTTGTTACAAAGATGAGATATGTAAGATTCTCGACATTGGCCTGATGTGCACTAGTTCTCTTCCGATCAACCGCCCCGCCATGAGAAGAGTGGTGAAGATGCTGCAAGAGATGGGATCAGAGAACCAGACCAAGCCTATAAAGAAAGATGGCAAGTTGTCACCTTATTACTGCGATGATGCCTCAGATCATGGAAGTGTAGTCTAA 2988 0.4786 MLPLFLLLCFLFPPPAVVSLNQDGLYLYKFKLSMTDADSSLSSWNDGDAHPCSWSGVTCDSTNTSVTELDLSSSNIAGPFSASILCDLTNLTTLILYNNSINDALHSEIALCRSLVHVDLSQNLLTGALPPTLSDLPNLRYLDLTGNNFSGLIPDSFANFQKLEVLSLVYNLLDGTIPASLGNITTLKMLNLSYNPFSPGRIPPELGNLANLEVMWLTQCNLVGVIPESFGKLKKLRDLDLALNNLDGPIPSSFIEMTSLEQIELYNNSLSGELPRGMGNLTALRLVDVAMNQLSGTIPDELCRLPLESLNLYQNQFEGELPASIANSPNLYELRLFANKLTGKLPSILGKNAPLRWVDVSDNQFRGQIPATLCDNGKLEELLMIYNSLSGNIPASFGRCRSLMRVRLGFNRLSGEVPAALWGLPHVYLLELTDNSFSGPIAKTIAGAGNLSLLTLSKNNFTGPIPEEIGWLENLEEFSGNDNMFNGSLPASIVNLGQLGTLDLHNNKLSGELPMGIRSWKKLNELNLANNEMGGNIPEEIGSLSVLNFLDLSKNQFSGKVPAELQNLKLNRLNMSYNHLSGELPAILAKDMYTTSFLGNPGLCGDWNSLCNGRDEAKATGYSWLLRIIFIIATAVFVVGVVWFYFKYKNFKKAKRAIDKSKWTLMSFHKLGFGEDEILNCLDDDSVIGSGSSGKVYKVVLSSGEAVAVKKLWGGVKKEMDSEDIEKGGVQDNAFDAEVETLGKIRHKNIVKLWCCCTTRDCKLLVYEYMPNGSLGDSLHGSKGGLLDWPTRYKIALDAAEGLSYLHHDCVPPIVHRDVKSNNILLDGDFGARVADFGVAKVVETNGKGTKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRRPVDPEFGEKDLVRWVYSTLDQKRVEHVIDSRLDPCYKDEICKILDIGLMCTSSLPINRPAMRRVVKMLQEMGSENQTKPIKKDGKLSPYYCDDASDHGSVV 995
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1706 995 Gene3D Transferase(Phosphotransferase) domain 1 770 986 - -
Lele16g1706 995 SUPERFAMILY RNI-like 68 417 - -
Lele16g1706 995 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 770 979 - -
Lele16g1706 995 Gene3D Ribonuclease Inhibitor 374 612 IPR032675 -
Lele16g1706 995 Gene3D Ribonuclease Inhibitor 276 373 IPR032675 -
Lele16g1706 995 SUPERFAMILY L domain-like 349 604 - -
Lele16g1706 995 Gene3D Ribonuclease Inhibitor 177 275 IPR032675 -
Lele16g1706 995 Gene3D Ribonuclease Inhibitor 20 176 IPR032675 -
Lele16g1706 995 Gene3D Phosphorylase Kinase; domain 1 666 769 - -
Lele16g1706 995 ProSitePatterns Serine/Threonine protein kinases active-site signature. 814 826 IPR008271 GO:0004672|GO:0006468
Lele16g1706 995 SUPERFAMILY Protein kinase-like (PK-like) 679 963 IPR011009 -
Lele16g1706 995 Pfam Protein kinase domain 685 903 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele16g1706 995 FunFam Leucine-rich receptor-like protein kinase family protein 202 300 - -
Lele16g1706 995 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 166 962 - -
Lele16g1706 995 FunFam Receptor-like protein kinase HSL1 666 769 - -
Lele16g1706 995 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 20 184 - -
Lele16g1706 995 Pfam Leucine rich repeat N-terminal domain 21 60 IPR013210 -
Lele16g1706 995 Pfam Leucine rich repeat 137 196 IPR001611 GO:0005515
Lele16g1706 995 Pfam Leucine rich repeat 211 270 IPR001611 GO:0005515
Lele16g1706 995 SMART serkin_6 682 948 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele16g1706 995 ProSiteProfiles Protein kinase domain profile. 682 965 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele16g1706 995 ProSitePatterns Protein kinases ATP-binding region signature. 688 711 IPR017441 GO:0005524
Lele16g1706 995 SMART LRR_typ_2 209 232 IPR003591 -
Lele16g1706 995 SMART LRR_typ_2 281 305 IPR003591 -
Lele16g1706 995 SMART LRR_typ_2 496 520 IPR003591 -
Lele16g1706 995 SMART LRR_typ_2 136 159 IPR003591 -
Lele16g1706 995 SMART LRR_typ_2 88 112 IPR003591 -
Lele16g1706 995 SMART LRR_typ_2 257 280 IPR003591 -
Lele16g1706 995 FunFam Receptor-like protein kinase HSL1 306 613 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1706 Lele-ChrLele16 9916056 9919256 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1706 15 995 Receptor kinase-like Gene Family AT1G28440 70.040 0.0 1396
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele16g1706 Pkinase 1.2e-41 CL0016