Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1705 ATGAACCATCTTATTCCCAACCATATTGCCTATGATTTGGTCATGCTTGCTCTATCAATATTCCTCGTCCTCCTCGCCCTAATGCTCTTCCTCGCCTGCAGAAAGAAACCAGTACAATCCGAAGAAACACTCCCTGTCAAAATCTGTGCTCGTTCATACCCATTAACGGACATCGACTCCGCCACCGACGGATTCAACCACCAGAGAATCGTCGGCAAGGGACGACTCGGAACCGTGTACGCAGGATTATTTGAAAAAGAAGAACTCGTGGCAGTCAAAAGGATTCACCCATGGCTTGTTCTCAGCAACGCAGGACTTGGATTCTCCTCTGTGATGAAATGGCTCTCATCAGCACAACACCCCAACATAGTTCCCATCACCGGCTTCTCAGAAGCCGCCGGCGAGAGAATCATAGTGAGCGAATTCGTGAGAATGGTAAGCCTGGAGTTCTATCTGCATCAAAACCCAAGCGGGGCTTCGCTTTTGGATTGGACAAAGAGGCTGAGAATCGTCGCCGGAGCAGCAAGAGGGCTTGAATATCTTCACGAAGTGGTTGCACCAACCATAGTTCACGGCAGTGTAAAGTCGTCGAACATCCTCATCGACGTGAACTTCTGCGCCAGAATCTCCGACTATGGACTCAACTTTCTGGAACCAATGAAAGACAAAAGAGGGGTTATAGGGTATTTAGATGAAGAATATTGGGATGAAAAATTTGGTGGTGCAAGTAAAGAAAGTGATGTGTATGGATTAGGGGTGGTTTTGTTGGAGGTCTTGAGTGGAAGAAGGTGTGAAGAAGGGCTGATAGTGAAGTGGGCAGTGCCATTGATAAAAGGACTGAGATATAATGAAGTTTTGGATCCAAGATTGGCGATTCCTTCAGATTTGAAGGCACTTGAGAGATTAGCTAAAGTTGCTTTGGCTTGTGTGGCTAATTCTAGGAAATGTAGGCCTTCTATTGCTCATGTAGCAACTATTTTGAACAATTTAGTGGTTGAGGTATGCATGTGA 1011 0.4599 MNHLIPNHIAYDLVMLALSIFLVLLALMLFLACRKKPVQSEETLPVKICARSYPLTDIDSATDGFNHQRIVGKGRLGTVYAGLFEKEELVAVKRIHPWLVLSNAGLGFSSVMKWLSSAQHPNIVPITGFSEAAGERIIVSEFVRMVSLEFYLHQNPSGASLLDWTKRLRIVAGAARGLEYLHEVVAPTIVHGSVKSSNILIDVNFCARISDYGLNFLEPMKDKRGVIGYLDEEYWDEKFGGASKESDVYGLGVVLLEVLSGRRCEEGLIVKWAVPLIKGLRYNEVLDPRLAIPSDLKALERLAKVALACVANSRKCRPSIAHVATILNNLVVEVCM 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1705 336 Gene3D Transferase(Phosphotransferase) domain 1 145 334 - -
Lele16g1705 336 SUPERFAMILY Protein kinase-like (PK-like) 43 327 IPR011009 -
Lele16g1705 336 FunFam Receptor protein kinase CRINKLY4 144 334 - -
Lele16g1705 336 Pfam Protein tyrosine and serine/threonine kinase 68 325 IPR001245 GO:0004672|GO:0006468
Lele16g1705 336 PANTHER OS01G0253100 PROTEIN 48 330 IPR045271 -
Lele16g1705 336 ProSiteProfiles Protein kinase domain profile. 65 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele16g1705 336 FunFam serine/threonine-protein kinase-like protein ACR4 32 142 - -
Lele16g1705 336 Gene3D Phosphorylase Kinase; domain 1 30 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1705 Lele-ChrLele16 9906115 9907125 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1705 50 334 Receptor kinase-like Gene Family AT3G59420 40.268 1.07e-59 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Lele16g1705 PK_Tyr_Ser-Thr 2.8e-26 CL0016