Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1703 ATGCATCAAGCCATTCCATATAGGACCTGGCTCCCGGCCGGAGCACGTGCCACACGTGACCTATCTACTTCAGCGGCGACCCCAGGTCTGTTCTCCGGAGGAATTAGCGGACAGCCCAATGGTGTTGATCCCGGTACCGTGGCGACGGCGATGGTCTCGGAGAACGCGGTCATAATAATCGGAAAACGCGGGTGCTGCATGTGCCACGTGGTGCAGAGGTTGTTACAAGGTCTTGGTGTGAACCCTCCCGTGTACGAGGTAGCCGAGGCAGAGGAGGCCGCCGTGGCCGGAGAGCTGTCCAGGAAGATTGGTTTCTGCAACGGCGCTGGCGGCGTCGAAGGAGTGCAGTTTCCGGCGGTGTTTGTGGGAGGGAAGTTGTTTGGAGGATTGGAAAGAGTGATGTCCACACATATCTCCGGCGAGCTGGTTCCGATCCTGAAGGACGCCGGGGCCTTGTGGCTCTGA 465 0.5935 MHQAIPYRTWLPAGARATRDLSTSAATPGLFSGGISGQPNGVDPGTVATAMVSENAVIIIGKRGCCMCHVVQRLLQGLGVNPPVYEVAEAEEAAVAGELSRKIGFCNGAGGVEGVQFPAVFVGGKLFGGLERVMSTHISGELVPILKDAGALWL 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1703 154 Pfam Glutaredoxin 57 126 IPR002109 -
Lele16g1703 154 Gene3D Glutaredoxin 46 153 - -
Lele16g1703 154 PANTHER GLUTAREDOXIN 49 154 IPR011905 -
Lele16g1703 154 TIGRFAM GlrX-like_plant: glutaredoxin-like family 50 154 IPR011905 -
Lele16g1703 154 ProSiteProfiles Glutaredoxin domain profile. 45 153 - -
Lele16g1703 154 SUPERFAMILY Thioredoxin-like 48 153 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1703 Lele-ChrLele16 9888867 9889331 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1703 50 154 Miscellaneous Gene Families AT3G02000 45.283 5.03e-24 89.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele16g1703 16 9888867 9889331 Lele13g0807 13 19825420 19834510 CCT
Lele16g1703 16 9888867 9889331 Lele14g0697 14 18197049 18205890 CCT
Lele16g1703 16 9888867 9889331 Lele15g1672 15 9963121 9972214 CCT
Lele16g1703 16 9888867 9889331 Lele16g1709 16 9943797 9952800 CCT
Lele16g1703 16 9888867 9889331 Lele16g1703 16 9888867 9889331 ECH
Lele15g1667 15 9927438 9927878 Lele16g1703 16 9888867 9889331 ECH
Lele13g0812 13 19865545 19865997 Lele16g1703 16 9888867 9889331 hybridization
Lele14g0703 14 18251604 18252068 Lele16g1703 16 9888867 9889331 hybridization