Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1701 ATGGTTTTCAACCAAGGAAAGGTAGAGGCAGAGTTGTTTCAAGCTCAGTCCCATCTGTATAAACACGTCTTCAATTTCTTGGGCTCCATGTGTCTTAGGAGTGCTCTGCAGCTGAACATACCAGACATAATCCACAGCAATGGCCGACCCATCACCCTCCCTGAGCTGCTCTCGGCTCTCCAGATGGACCCCGAAAAATCTTCCCATCTCTATAGGCTCATGCGCTTGCTGGTTCATTCTGGCATCTTTCAACTACCAAAGTCCATAAAGGCGATGGGGAAGAAGAGGGATATGATCTCACACCCTCCTCTAGGCTTCTACTCAAAGACAATGTCCCAACCAAAACCAGAGTATAACAGACTCTTCAATGAATCTTTGATTAGTGACTCAAGCATGATGAACTTGGTAATTAAAGATTGGAAATCAGTTTTTGAGGGATTCGATTCATTGGTCGATGTTGGGGGTGGAACAGGAGCTGTGTCTAGGATCTTATCCGAGTCATTGCTTGATCTGCAGTGCACTGTGCTAGATCTTCCACATGTTGAAGACTTACAGGACAGCAGAAATTTGAAGTTCGTTGGAGGGGATATGTTTCAGTCTATTCCTACAGCAGATGCCGTTCTTCTTAAGTTGGTTTTACATGCTTATAGTGATGAAGACTGTATGAAGGTACTCGAGAAGGGTAGGGAAGCTATCGCAAGAAAAGGCAAAGAGGGGAAAGTGATTATTATAGACATAGTGATCAATAAGAAGAAAGATGAACACGATCTGAAAGATGCGAAGCTGTTCGTCGATGTGTTGATGATGACTGTGGTTACTGGAAGGGAGAGAGAAGAAAAAGAATGGAAGAACTTATTCCTGGAACCTGGGTTCAGTTACTACAAGATAACACCTATTTTTTGCATAAGGTCCCTCATTGAAGTTTATCCCTGA 933 0.4341 MVFNQGKVEAELFQAQSHLYKHVFNFLGSMCLRSALQLNIPDIIHSNGRPITLPELLSALQMDPEKSSHLYRLMRLLVHSGIFQLPKSIKAMGKKRDMISHPPLGFYSKTMSQPKPEYNRLFNESLISDSSMMNLVIKDWKSVFEGFDSLVDVGGGTGAVSRILSESLLDLQCTVLDLPHVEDLQDSRNLKFVGGDMFQSIPTADAVLLKLVLHAYSDEDCMKVLEKGREAIARKGKEGKVIIIDIVINKKKDEHDLKDAKLFVDVLMMTVVTGREREEKEWKNLFLEPGFSYYKITPIFCIRSLIEVYP 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1701 310 PANTHER O-METHYLTRANSFERASE 11 294 IPR016461 GO:0008168
Lele16g1701 310 Pfam O-methyltransferase domain 113 292 IPR001077 GO:0008171
Lele16g1701 310 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 310 IPR016461 GO:0008168
Lele16g1701 310 PIRSF O-mtase 104 310 IPR016461 GO:0008168
Lele16g1701 310 PIRSF O-mtase 2 100 IPR016461 GO:0008168
Lele16g1701 310 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 114 309 IPR029063 -
Lele16g1701 310 Gene3D - 3 94 IPR036388 -
Lele16g1701 310 Gene3D Vaccinia Virus protein VP39 95 310 IPR029063 -
Lele16g1701 310 CDD AdoMet_MTases 150 248 - -
Lele16g1701 310 Pfam Dimerisation domain 30 78 IPR012967 GO:0046983
Lele16g1701 310 SUPERFAMILY "Winged helix" DNA-binding domain 8 86 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1701 Lele-ChrLele16 9857848 9859049 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1701 30 296 Monolignol Biosynthesis Gene Families AT5G54160 29.874 4.74e-33 123