Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1700 ATGGCTCGTACCAAGCAAACCGCTCGCAAATCCACCGGTGGGAAGGCTCCGAGGAAGCAACTGGCAACCAAGGCTGCTAGGAAGTCTGCTCCGGCTACCGGAGGTGTGAAGAAGCCCCATCGTTTCAGACCAGGGACCGTGGCTCTTCGTGAGATCAGGAAGTACCAGAAGAGTACTGAGCTTTTGATCAGGAAACTTCCTTTCCAGCGTCTGGGGAGATTTCACATGATTAAAACGTTAGAATTTTCCCAGACCTGCCTCATCCTATATAATCTGTTTCGAAAACAGAGGGACCTGCAAAAAATGGATAGCCATGGAGCAGAAGAGTTGTTCCAAGAACAGGCTCATTTATTGACCCTGCAAAATCTGGTTTTCTCTATAGACTCATGCGCTTCTTGGTTCACTCTCGCCTTTTTGTCAAAACCAAAGTTGACAAAAGAGGCAAGGAAGAAGAGGAGGCTTATGATCTCTCACCCTGTTCTAGGCTTCTCCTCAAAAGAAATACCCCCCAACTTGACTTGTTTTGCACAGTCAGTTTTTCACCCTGTTCTTTCAGATCCATGGAAATTTCTGGGAGATTGGTTCTACAGAGAAGAGGGGAACCCTTTCCACTGTACATATGGGATGGGGTTTTGGGAGCATGGAAGTGAGAACCCTGAGTATGCCAAGCTTTATAATGAAGCTATGGTGAGTGATTCTGGGATGATGACCTTGGTGATTAGAGATTGCGGATCAGTTTTTGAAGGTATGCAGTCCATGGTTGATGTTGGAGGTGGGAAAGGAGCTGTGGCTAGGATCATTTCTGAGGAGTTTCCTGATATGAAATGCACAGTGCTTGATCTTCTCCATGTTATTGGGGATTTGCAGGATAGTGAAAATCTCAAGTTTGTTGGAGGTGATATGTTTTACCATATTCCTCCTGCTGATTCCATTCTTCTCAAGCACCGTTCGAAAGATGAACTTATAAGCCCCCATCTATTCCTCCTTATCTGCTTAACATTAATTTCTTCTACATGTATTACTATTCATCAGAGAAGAGAGGGATCCGCACCTGGAAAAATGGCTTTCAACCAAGGAAAGGTAGAGGCAGAGTTGTTTCAAGCTCAGTCCCATCTGTATAGACACGTCTTCAATTTCTTGGGCTCCATGTGTCTTAAGAGTGCTCTGCAGCTGAACATACCAGACATAATCCACAGCCATGGCCGACCCATCACCCTCCCTGAGCTGCTCTCGGCTCTCCAGATGGGCCCCGAAAAATCTTCCCATCTCTATAGGCTCATGCGCTTGCTGATTCATTCTGGCATCTTTTCAACTACCAAAGTCCCTAAAGGCGATGGGGAAGAAGAGGGATATGATCTCACACCCTCCTCTAGGCTTCTCCTCAAGGACAATGTCCCAAGTTTGTCTCCTTTCGTTCGGATGATTCTTCATCCAGCTGTAGTGCATTCATCGGAATGCTTGGGAGATTGGTTTAGCAGTAATGAGCCCACCCCCTTTCACACTGCACATGGGATGGGATTGTGGGACTATCTCAGCCAAAACCAGGAGTATAACAGACTCTTCAATGAATCTTTGATTAGTGATTCAAGCATGATGAACTTGGTAATTAAAGATTGGAAATCAGTTTTTGAGGGATTCGATTCATTGGTTGATGTTGGGGGTGGAACAGGAGCTGTGTCTAGGATCTTATCCGAGTCACTACCGAATCTGCAGTGCACTGTGCTGGAGCTTCCACATGTTGTTGAAAACTTACAGGACAGCAGAAACTTGAAGTTCATTGCAGGGGATATGTTTCAGTCTATTCCTACAGCAGATGCCGTTCTTCTTAAGTTGGTTTTACATGCTTTCAGTGATGAAGACTGTGTGAAGGTGCTCAAGAATTGCAGGGAAGCTATCGCCAGCAAAGACAAAGAGGGGAAAGTGATTATTATAGACATAGTGATCAATGAGAAGGGAGATGACCACGACCTGAAAGATGTTAAGCTGTTGTGCGATGTGTTGATGATGACTGCGGGCACTGGAAGAGAGAGAGAAGAAAAGGAATGGGAGAAGCTGTTCCTGGAAGCTGGGTTCAGTCACTACAAGATAACACCTATTTTGGACGTGAAGTTCCTGATTGAAGTTTATCCTTGA 2133 0.4534 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLGRFHMIKTLEFSQTCLILYNLFRKQRDLQKMDSHGAEELFQEQAHLLTLQNLVFSIDSCASWFTLAFLSKPKLTKEARKKRRLMISHPVLGFSSKEIPPNLTCFAQSVFHPVLSDPWKFLGDWFYREEGNPFHCTYGMGFWEHGSENPEYAKLYNEAMVSDSGMMTLVIRDCGSVFEGMQSMVDVGGGKGAVARIISEEFPDMKCTVLDLLHVIGDLQDSENLKFVGGDMFYHIPPADSILLKHRSKDELISPHLFLLICLTLISSTCITIHQRREGSAPGKMAFNQGKVEAELFQAQSHLYRHVFNFLGSMCLKSALQLNIPDIIHSHGRPITLPELLSALQMGPEKSSHLYRLMRLLIHSGIFSTTKVPKGDGEEEGYDLTPSSRLLLKDNVPSLSPFVRMILHPAVVHSSECLGDWFSSNEPTPFHTAHGMGLWDYLSQNQEYNRLFNESLISDSSMMNLVIKDWKSVFEGFDSLVDVGGGTGAVSRILSESLPNLQCTVLELPHVVENLQDSRNLKFIAGDMFQSIPTADAVLLKLVLHAFSDEDCVKVLKNCREAIASKDKEGKVIIIDIVINEKGDDHDLKDVKLLCDVLMMTAGTGREREEKEWEKLFLEAGFSHYKITPILDVKFLIEVYP 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1700 710 MobiDBLite consensus disorder prediction 1 40 - -
Lele16g1700 710 SUPERFAMILY "Winged helix" DNA-binding domain 361 464 IPR036390 -
Lele16g1700 710 FunFam O-methyltransferase ZRP4 462 710 - -
Lele16g1700 710 PRINTS Histone H3 signature 58 75 IPR000164 GO:0000786|GO:0003677|GO:0030527
Lele16g1700 710 PRINTS Histone H3 signature 3 17 IPR000164 GO:0000786|GO:0003677|GO:0030527
Lele16g1700 710 PRINTS Histone H3 signature 34 55 IPR000164 GO:0000786|GO:0003677|GO:0030527
Lele16g1700 710 PRINTS Histone H3 signature 17 31 IPR000164 GO:0000786|GO:0003677|GO:0030527
Lele16g1700 710 Pfam Dimerisation domain 383 430 IPR012967 GO:0046983
Lele16g1700 710 Gene3D Histone, subunit A 2 116 IPR009072 GO:0046982
Lele16g1700 710 PANTHER O-METHYLTRANSFERASE 364 695 IPR016461 GO:0008168
Lele16g1700 710 FunFam Histone H3 2 76 - -
Lele16g1700 710 SMART h35 34 115 IPR000164 GO:0000786|GO:0003677|GO:0030527
Lele16g1700 710 ProSitePatterns Histone H3 signature 1. 15 21 IPR000164 GO:0000786|GO:0003677|GO:0030527
Lele16g1700 710 Gene3D - 355 460 IPR036388 -
Lele16g1700 710 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 467 708 IPR029063 -
Lele16g1700 710 CDD AdoMet_MTases 549 648 - -
Lele16g1700 710 Pfam Core histone H2A/H2B/H3/H4 1 73 IPR007125 GO:0003677
Lele16g1700 710 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 373 710 IPR016461 GO:0008168
Lele16g1700 710 FunFam Coniferyl alcohol 9-O-methyltransferase 355 460 - -
Lele16g1700 710 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 170 314 IPR029063 -
Lele16g1700 710 Pfam O-methyltransferase domain 487 692 IPR001077 GO:0008171
Lele16g1700 710 Pfam O-methyltransferase domain 188 315 IPR001077 GO:0008171
Lele16g1700 710 Gene3D Vaccinia Virus protein VP39 167 344 IPR029063 -
Lele16g1700 710 Gene3D Vaccinia Virus protein VP39 461 710 IPR029063 -
Lele16g1700 710 SUPERFAMILY Histone-fold 2 72 IPR009072 GO:0046982
Lele16g1700 710 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 87 315 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1700 Lele-ChrLele16 9847955 9856770 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1700 383 697 Monolignol Biosynthesis Gene Families AT5G54160 33.750 1.37e-46 167