Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1695 ATGGAACAAGTATATAAAGTGTTTCTGCTACTACTTCTATACCAATCTCTGCTTGTATCAGCACAGAGCTCCTATCAGGACTCTAGTTCCCTACAATCTCTCACAGAATCTTGGCAGAACAAACCACCAAGCTGGGGGGGTTCAGATCCTTGTGGCAGTGGTTGGGAAGGAATTCGATGCACCAATTCAAGAGTGACCTCAATAATATTAGCAAGCATGAATTTGGGGGGCAGGCTGTCTTCAGATATCCAGTTATTATCTGAGTTAGACACTTTGGATCTCTCTTTCAACAAGGGCCTGACAGGAACAATTCCGAAAGAGATTGGAAATTTGAGAAAATTAAAAACCCTTATATTGGTTGGTTGTAGTTTCTCTGGTGACATTCCGGATTCAATAGGATCTTTGCAGCAGCTGACTTTTCTAGCTCTGAACTCTAATCAGTTCAGTGGAAACATTCCACCTACCATCGGCAATCTATCCAATATTAATTGGCTAGACCTTTCTGATAACCAGCTTGAAGGACCTATCCCAATCTCTAATAAGAAAGGAGTACTTGGTCTTGACAAGCTGCTTAAGGCAAAGCACTTTCACATGGGGAACAATAGGCTCTCAGGTGGAATCCCAGCTGAACTTTTTAATCCAAATATGAGTCTGATCCATGTGCTTTTTGACAGCAATCAACTAAGTGGCGGTATTCCTAGTGCCCTTGGGCAGGTGAACTCATTGGTGGCAGTCCGTTTCGATAGGAACCAATTAAGTGGGAGTGTACCTTCAAATATCAACAATCTCAGAAATCTTAGTGATCTGTATTTATCAAATAATAGGTTGAATGGTTCTCTGCCAGATCTTACTGGAATGAATCTTCTAACCTATGTGGATCTGAGTAACAATACTTTCAATTCTTCTGTTATTCCTTCATGGGCTTCAAGTTCGCCGCTCATGACAACATTAAAGTTGGAGAACACCAACCTTCAAGGGGAGATACCTGCCTCCTTATTTAACCAACCCAGTTTAGAGTCTGTGGTATTGAAGGGAAACCAGCTCAGTGGCACCTTAGATATTGGCAATGCCGACAGCAACCGATTGAAACTAATTGATTTGGAGAATAACACAATCACTGCCTTCACGGAGAAAAACATGGACTATAAAGTTTCAGTAGTGCTAGTTCGCAACCGGATTTGCCTTGAAGCAGAAGCTTCTACCGAACCTTACTGCCAAGAACCGGACTCCAATTCCTTATATTCAACACAGCCAACTAATTGCTCGCCTCTTCCTTGCAGTTCTGGCCAGATTTCCATTTCAAGTACTGCTTTTGTGATTAGCAGCCAGCTTCCTAAGTTCCCAAAATTTTTCCTTCCTTATTTCTTCATCGGTGATGACTATGGATACTATGCAGGAAATGGATCAAAGAGGTCATCACATACAGGGGTTATAGTTGGTGTAGTAGTAGTTGTTGTGGTTGTTCTGGTAGTAGCGCTCCTTGCAGGAATATATTATGTACGTCGGAAGAGAAGAGCAAAAGGATCCGCTGAACTGAACCCGTTTGTAAACTGGGAACTGAACAACAACAGCGGCATGGCTCCTCAGTTAAAAGGTGCACGATGGTTTTCTTTAGAAGAGCTAAAGAAATGCACCAACAACTTCTCTGAAGACAACTCAGTTGGATCTGGAGGCTATGGAAAGGTTTACCGAGCTGTTCTGCCCACTGGAGAACGAGTTGCCATCAAACGGGCTGCAAAAGAATCAATGCAGGGTGCTGTAGAGTTCAAAACTGAGATTGAACTACTATCAAGAGTCCATCATAAGAACCTTGTCGGTCTTGTGGGTTTCTGTTTCGATAAAGGCGAACAAATGCTGGTGTATGAGTATATTCCAAATGGCACTTTAATGGATAGTCTTTCAGGAAAGTCTGGGATCAGAATGGATTGGATGAGAAGGCTTAAAGTAGCCCTGGGTGCAGCCAGGGGTCTGGCCTATCTTCATGAACTTGCCAACCCACCAATCATACACAGGGACATAAAATCGAGCAATATCCTGCTCGACGATCACCTTAACGCGAAAGTCGCGGATTTCGGACTCTCCAAGCTTCTTGTTGACAGTGAAAGAGGCCATATCACTACTCAAGTCAAAGGGACAATGGGTTACTTGGATCCTGAGTACTACATGACCCAACAGTTGACTGAAAAGAGTGATGTATATAGCTATGGAGTGATGATGCTGGAACTAGTGACAGCAAGAAGGCCAATAGAGAAAGGGAAATATATTGTGAGAGAGGTACAGAATGTAATGGATACATCAAAAGAACTATTCAACCTTCATTCAATCATAGATCCATTCATCAACAAAGTAACTCCATATGGTTTGGACAAGTTTGTGCACCTGGCAATGAGGTGTGTCAAAGAATATGCAGCTGAGAGGCCATCGATGGCTGAGGTGGTGAAGGAAATTGAGAATATAATGGAGCTTAATAGAATGAACCCTACTTCTGAATCAGATCCAACAACAGAAGAAATTGATGTGGACGCAAGTGGCGGCAAATTAAGCCATCCTTATGGCGCCCATGAAGGTTTTAGCTATAGTGGACCCTTTCCTTCAACGAAGGTAGAACCTCAGTGA 2616 0.4278 MEQVYKVFLLLLLYQSLLVSAQSSYQDSSSLQSLTESWQNKPPSWGGSDPCGSGWEGIRCTNSRVTSIILASMNLGGRLSSDIQLLSELDTLDLSFNKGLTGTIPKEIGNLRKLKTLILVGCSFSGDIPDSIGSLQQLTFLALNSNQFSGNIPPTIGNLSNINWLDLSDNQLEGPIPISNKKGVLGLDKLLKAKHFHMGNNRLSGGIPAELFNPNMSLIHVLFDSNQLSGGIPSALGQVNSLVAVRFDRNQLSGSVPSNINNLRNLSDLYLSNNRLNGSLPDLTGMNLLTYVDLSNNTFNSSVIPSWASSSPLMTTLKLENTNLQGEIPASLFNQPSLESVVLKGNQLSGTLDIGNADSNRLKLIDLENNTITAFTEKNMDYKVSVVLVRNRICLEAEASTEPYCQEPDSNSLYSTQPTNCSPLPCSSGQISISSTAFVISSQLPKFPKFFLPYFFIGDDYGYYAGNGSKRSSHTGVIVGVVVVVVVVLVVALLAGIYYVRRKRRAKGSAELNPFVNWELNNNSGMAPQLKGARWFSLEELKKCTNNFSEDNSVGSGGYGKVYRAVLPTGERVAIKRAAKESMQGAVEFKTEIELLSRVHHKNLVGLVGFCFDKGEQMLVYEYIPNGTLMDSLSGKSGIRMDWMRRLKVALGAARGLAYLHELANPPIIHRDIKSSNILLDDHLNAKVADFGLSKLLVDSERGHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSYGVMMLELVTARRPIEKGKYIVREVQNVMDTSKELFNLHSIIDPFINKVTPYGLDKFVHLAMRCVKEYAAERPSMAEVVKEIENIMELNRMNPTSESDPTTEEIDVDASGGKLSHPYGAHEGFSYSGPFPSTKVEPQ 871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1695 871 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 624 832 - -
Lele16g1695 871 SUPERFAMILY Protein kinase-like (PK-like) 534 832 IPR011009 -
Lele16g1695 871 SMART serkin_6 548 820 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele16g1695 871 ProSiteProfiles Leucine-rich repeat profile. 265 287 IPR001611 GO:0005515
Lele16g1695 871 Gene3D Ribonuclease Inhibitor 186 391 IPR032675 -
Lele16g1695 871 FunFam Leucine-rich repeat family protein 26 181 - -
Lele16g1695 871 PANTHER RECEPTOR-LIKE PROTEIN 55 36 819 - -
Lele16g1695 871 SUPERFAMILY L domain-like 44 374 - -
Lele16g1695 871 ProSitePatterns Serine/Threonine protein kinases active-site signature. 668 680 IPR008271 GO:0004672|GO:0006468
Lele16g1695 871 Gene3D Phosphorylase Kinase; domain 1 518 623 - -
Lele16g1695 871 Pfam Protein kinase domain 549 814 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele16g1695 871 FunFam Leucine-rich repeat protein kinase family protein 517 623 - -
Lele16g1695 871 Gene3D Transferase(Phosphotransferase) domain 1 624 843 - -
Lele16g1695 871 FunFam Leucine-rich repeat protein kinase family protein 183 282 - -
Lele16g1695 871 CDD STKc_IRAK 554 819 - -
Lele16g1695 871 ProSitePatterns Protein kinases ATP-binding region signature. 554 580 IPR017441 GO:0005524
Lele16g1695 871 MobiDBLite consensus disorder prediction 823 871 - -
Lele16g1695 871 ProSiteProfiles Protein kinase domain profile. 548 820 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele16g1695 871 Gene3D Ribonuclease Inhibitor 15 185 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1695 Lele-ChrLele16 9817656 9823680 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1695 7 871 Receptor kinase-like Gene Family AT5G49780 41.057 0.0 612
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Lele16g1695 Pkinase 5.8e-49 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g0820 13 19916824 19919083 Lele16g1695 16 9817656 9823680 hybridization
Lele14g0712 14 18321542 18327573 Lele16g1695 16 9817656 9823680 hybridization