Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1693 ATGTTCAGGTCCAAGACTTGCAACTCCCTCCACCACCACCACCAATGGAAGCACGACAACATCAACTCCTCCTTCATCTCGCCTTCAAGCTTCCACAGAACCACTTACGCATCAGGAGTTGAGGAGGAGAGAAGTGCAGAACCAAAGCCAAGATGGAACCCAAAACCAGAGCAGATTCGAATACTGGAAGCCGTATTCAACTCAGGGATGGTGAACCCTCCAAGAGACGAGATCAGGAAGATCAGAGCCCAACTCCAAGAATATGGCCAAGTCGGTGACGCCAATGTCTTCTACTGGTTCCAGAACCGTAAATCCAGATCCAAACACAAGCTTCGTCACCTCCACAACTCTTCTAACGCCCATCAAACCCAAAACTCGAACAATTCCTCTTCCAAAGAAATCATAATACCACCTAATAAGCCATCATTAGTGTCTAATATTGTCTTCTCCGACGTCTCTTCTGATATTGTAGTTCCCATTTCTTCTGTTCCGCCGCCACCGCCGCCTCAGCCTTTCTTCTTTATTCCTGTGCATCAGCAGAATGGAGGAGCAGGAGGAGTGGCTAATAATGCTGTTCCTGTTTCTCAAGGTTTTTGCTTCTCTGAACTATCAAATGTGGTTCCACCTGAAGCTCCTAGTGATCATCATCATCATCAACAAATCAATGTTGGGTCTTGCACTAGGCTTTTGCTTAACGAAATCATGAATATCCACTCACCCTCCGAGAATGAGCAAGACAAGGTTATGCAAATGCAACACCACCCTCCAACCACTCGCACTACTGTCCCTCCGGCCACTACCACCACTGTTACTGTTCCATCCCCCATTATCTCTCAGATTCAAGGCGTGGGTGAGGCGCCGGTGACGGAAGAGGGCCCACCTTGTGGTTCGATGAAATCGATGGTGTTCATTAACGACGTCGCATTTGAAGTGGGTGTGGGACCGCTCAACGTGCGGGAGGCCTTCGGCGATGACGCCGTGCTCATCCACGGCTCCGGTCAGCCTGTGCTCATCGACGAATGGGGCGTCACCCTTCAACCTCTTCATCACGGCGCGTTTTATTACCTGGTGCGCACGTTATCGTGA 1086 0.4982 MFRSKTCNSLHHHHQWKHDNINSSFISPSSFHRTTYASGVEEERSAEPKPRWNPKPEQIRILEAVFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSKHKLRHLHNSSNAHQTQNSNNSSSKEIIIPPNKPSLVSNIVFSDVSSDIVVPISSVPPPPPPQPFFFIPVHQQNGGAGGVANNAVPVSQGFCFSELSNVVPPEAPSDHHHHQQINVGSCTRLLLNEIMNIHSPSENEQDKVMQMQHHPPTTRTTVPPATTTTVTVPSPIISQIQGVGEAPVTEEGPPCGSMKSMVFINDVAFEVGVGPLNVREAFGDDAVLIHGSGQPVLIDEWGVTLQPLHHGAFYYLVRTLS 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1693 361 FunFam WUSCHEL-related homeobox 11 49 116 - -
Lele16g1693 361 SMART HOX_1 47 114 IPR001356 GO:0003677
Lele16g1693 361 MobiDBLite consensus disorder prediction 109 135 - -
Lele16g1693 361 CDD homeodomain 48 110 IPR001356 GO:0003677
Lele16g1693 361 Gene3D - 49 114 - -
Lele16g1693 361 Pfam Homeodomain 49 109 IPR001356 GO:0003677
Lele16g1693 361 SUPERFAMILY Homeodomain-like 47 113 IPR009057 -
Lele16g1693 361 PANTHER WUSCHEL-RELATED HOMEOBOX 9 1 358 IPR044557 GO:0003700|GO:0050793
Lele16g1693 361 MobiDBLite consensus disorder prediction 117 135 - -
Lele16g1693 361 ProSiteProfiles 'Homeobox' domain profile. 45 110 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1693 Lele-ChrLele16 9810878 9812223 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1693 1 357 Wox Gene Family AT2G33880 40.931 3.89e-75 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Lele16g1693 Homeodomain 7e-15 CL0123