Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1684 ATGGGCTCAGGTGATTGGTTTAAGATAATTAGCTTAAGAAAATCTAAAGAAGGCAAATCAAAGAAAGCAAAGGGATCTCCAGCCTCCAAGAAACAAACCGCGTTGAAGTTGAAGAATTATACAGGGAAAGATTCAAGTAATCTAACAAATGGCACTGATGGTTCAAATCTTGTGTCACCTGGGGTATCAGTTGAAACTGTTGCTGCAACAATGATCCAGACAGCAGTCCGGGCTTATTTGGCTAGAAAATCTCTACGGCACTTGAAAGGTTGTGCAAAACTTAAGGTCCAGATGCAAGACCATTCTGTTAAAGACCAAGCCCGTAGAGCTGTAAGTTGTATTCATAAATGGAGCAAGATTCAGGCTGAGATTAGAACTCGTCGAATCTGTATGGTCACTAAAGACAGGATCAGGCTGAAGAAACTTGAATCTCAAATTAAACTCGAGGCAAAGCTCCATGATTTAGAGGTGGAATGGAGTGGCGGTTCTGAAACCATGGAGGAAACCTTGGCAAGGATACATCAGAGAGAAGAAGCGGCTGTTAAGCGGGAAAGATCCATGGCCTATGCCTTTTCTCATCAGTGGAGGGCTAACTCAAACCAAGGGCTCGGTAACTATGAACTTAACAAAGCTAATTGGGGTTGGAGCTGGAAGGAACGCTGGATTGCCGCTCGCCCGTGGGAAAGGCGTGTCGTTGAGAAGGCCGTTAATCCCAAGAAAGCTCAAACGAAGCAGCCGAAGAAGGCTCAAAAGGACAAGAAACCATCAACACCGAAAACACCTGTTTCGGTGAAACCTCCTGTCGCTAATGCAAAAGTGACCCCAAAAGCTAGGCGATTATCTTATCCTGCCTCAGAGAAAACTTTATGTGACATAATTGATTCAGATGGTACTTATCAACCAGTCATGGTTTCGATCTTGAGAAGGCTATCGACGACCGTGTTGTTACCCAGAGCATCTCTCTCCAAATTCATGGAGTCTTCTTCCAACGTCAATAGCAATTATAATGTGGGATCACAGAGACTCCTCGCCTTAGCTCAGCAGCTTCGCCTTTACAAACCTCCATCATTTCCTGACGACATCGATGAGCAAACAATTGAAGAAAATGGGGGGAAGGTTGTTTCCCAAGTCGGATTTCCAGAGTCGACCACTCCAATTGCTCAAAACCCGGAAAATTTTAGACCTAAACGAGCTGCTGTTTTGATCTGCCTTTTCGAAGGGGATGCTGGGGATCTAAGGGTGATTCTAACTAAGCGATCATCCAAACTGTCTAGTCACTCGGGTGAAGTGGCCTTGCCTGGTGGGAAAGCAGATGAAGGGGATAAGGATGATGAGGATACTGCAAAAAGAGAGGCGAAGGAGGAAATTGGGTTGGACCCTGAACTTGTTAATGTCGTTACTTTTCTTGAACCATTCTTATCCAAGCACCTACTGAGAGTGGTTCCTGTCATTGGCATACTTCATGACAAGAGAGCTTTTAAACCTGTTCTGAATCCTGCTGAAGTGGAATCGGTATTTGATGCACCTTTAGAAATGTTTCTCAAGGATGAAAATCGTTGTCAGGAGGAAAGGGAGTGGATGGGACAGAAGTATCTACTACATTTCTTTGACTACGAAACCAATCATAAAAAATATCTCATATGGGGTTTAACCGCTGGGATCTTGATTAGGGCTGCATCAGTGGTGTATCAACGGCCCCCAGCTTTCGTGGAGCAAAATCCTAGGTTCAAGTTTCCCCAGGATGCAAGCAAGGAATCTGTAATGCGTTGA 1770 0.4458 MGSGDWFKIISLRKSKEGKSKKAKGSPASKKQTALKLKNYTGKDSSNLTNGTDGSNLVSPGVSVETVAATMIQTAVRAYLARKSLRHLKGCAKLKVQMQDHSVKDQARRAVSCIHKWSKIQAEIRTRRICMVTKDRIRLKKLESQIKLEAKLHDLEVEWSGGSETMEETLARIHQREEAAVKRERSMAYAFSHQWRANSNQGLGNYELNKANWGWSWKERWIAARPWERRVVEKAVNPKKAQTKQPKKAQKDKKPSTPKTPVSVKPPVANAKVTPKARRLSYPASEKTLCDIIDSDGTYQPVMVSILRRLSTTVLLPRASLSKFMESSSNVNSNYNVGSQRLLALAQQLRLYKPPSFPDDIDEQTIEENGGKVVSQVGFPESTTPIAQNPENFRPKRAAVLICLFEGDAGDLRVILTKRSSKLSSHSGEVALPGGKADEGDKDDEDTAKREAKEEIGLDPELVNVVTFLEPFLSKHLLRVVPVIGILHDKRAFKPVLNPAEVESVFDAPLEMFLKDENRCQEEREWMGQKYLLHFFDYETNHKKYLIWGLTAGILIRAASVVYQRPPAFVEQNPRFKFPQDASKESVMR 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1684 589 MobiDBLite consensus disorder prediction 435 453 - -
Lele16g1684 589 ProSiteProfiles IQ motif profile. 65 93 IPR000048 GO:0005515
Lele16g1684 589 MobiDBLite consensus disorder prediction 425 453 - -
Lele16g1684 589 SUPERFAMILY Nudix 392 555 IPR015797 -
Lele16g1684 589 CDD CoAse 396 556 IPR045121 GO:0010945
Lele16g1684 589 Pfam NUDIX domain 396 475 IPR000086 -
Lele16g1684 589 PANTHER NUDIX HYDROLASE 337 584 IPR045121 GO:0010945
Lele16g1684 589 FunFam Nudix hydrolase 11 377 560 - -
Lele16g1684 589 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 380 560 - -
Lele16g1684 589 MobiDBLite consensus disorder prediction 234 276 - -
Lele16g1684 589 SMART iq_5 64 86 IPR000048 GO:0005515
Lele16g1684 589 ProSiteProfiles Nudix hydrolase domain profile. 395 551 IPR000086 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1684 Lele-ChrLele16 9760101 9765366 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1684 1 285 IQD Protein Family AT2G33990 50.172 5.27e-77 243
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele16g1684 16 9760101 9765366 Lele16g1684 16 9760101 9765366 ECH
Lele13g0831 13 19997191 20003098 Lele16g1684 16 9760101 9765366 hybridization
Lele14g0723 14 18381620 18386936 Lele16g1684 16 9760101 9765366 hybridization