Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1661 ATGGTTTACTGCTCTTATAATTCGATTTCTTCGTCTGGCTCCGATGTCTCGAGGCTGTTCAATCCAACTTCGCATAAAATTGTTGATTCTAATGGGGTTTCACAGAGTGGGTTGGCGTCACCGAATTCGTTGGTATTGAATAGTGAGAAGGAGGATCTAATTAATTCCCCTATAAAGATAGGAAAGAGAGAGGCGTCTGAGGCAAAAGCTTTGGCTGCTATGAAGAACCACAGTGAAGCTGAGAGAAGGAGAAGGGAGAGAATAAATGGTCATCTCGATACACTTCGTGGTCTTGTGCCCAGCAATGTGAAGATGGATAAAGCAACGTTATTGGGTGAAGTTATCAACCAAGTTAAGTTACTGAAGAAGAATGCAACGGAAGCAAGCAGAGGTTTTCTCATCCCAATGGATGATGATGAAGTTAAAGTTGAACCATACAACCATGAAGGAAGAGAAGGATCATCGATGTTTTACACGGCATCTATATGTTGCGATTACCGGCCAGAGCTACTATCTGACCTAAGACAGGCTCTTGATGGCCTTCAACTACAATTGATGAGGGCAGAAATATCAACTTTGGGAGGAAGGGTGAAGAATGTATTTTTCTTTAGATGCTGCAAATTAACAGAACATATGAATATTGAGGCATGTCAACTTGTTCCAAGAACTGTCCACCAGGTACTAAGTTCTGTGCTGGAGAAGGCTTCTGGCTCACTGGAATACTCCCTAGGAATGTCGTCACTTCGAAGCAAGCGTAGAAGACTTTGCTTCATTGAAACATCAACTTCCTCATGA 795 0.4239 MVYCSYNSISSSGSDVSRLFNPTSHKIVDSNGVSQSGLASPNSLVLNSEKEDLINSPIKIGKREASEAKALAAMKNHSEAERRRRERINGHLDTLRGLVPSNVKMDKATLLGEVINQVKLLKKNATEASRGFLIPMDDDEVKVEPYNHEGREGSSMFYTASICCDYRPELLSDLRQALDGLQLQLMRAEISTLGGRVKNVFFFRCCKLTEHMNIEACQLVPRTVHQVLSSVLEKASGSLEYSLGMSSLRSKRRRLCFIETSTSS 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1661 264 Coils Coil 171 191 - -
Lele16g1661 264 CDD ACT_UUR-ACR-like 161 202 - -
Lele16g1661 264 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 72 121 IPR011598 GO:0046983
Lele16g1661 264 PANTHER TRANSCRIPTION FACTOR BHLH30 34 259 IPR045847 GO:0003700|GO:0006355
Lele16g1661 264 SMART finulus 78 127 IPR011598 GO:0046983
Lele16g1661 264 Gene3D - 67 130 IPR036638 GO:0046983
Lele16g1661 264 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 76 127 IPR036638 GO:0046983
Lele16g1661 264 Pfam Helix-loop-helix DNA-binding domain 76 121 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1661 Lele-ChrLele16 9652357 9654716 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1661 69 255 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G40200 38.095 2.90e-33 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele16g1661 HLH 9.6e-10 No_clan