Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele16g1646 | ATGGATGCATATGGAATGGAAAAAACTTCAAATGTCAAACAAGCAGCAGTTCATGATGCGATTAGATCATGTTCCTTCGTGTCTGTTTCTGGGTTTCTTCCTCATCTTCTTCTCCTTACCTCCCTTTTAGGTGTGTTTCCAACTAGGTTTGTGAAAGTTCTTTTCTTTCTCATTCTAGATGCAAGGAAGCTATCATATCTTGAGCATTATTATTACAGAATAATGGCAATGTCGTCATCAGAAGGAATATTTCAGATCGAAGACAAGAAGAACAGCAGGTGTACCGAGGAAACTTCATTGGGATCTTCTCAGACATGCTCGTCCTTTGACTTGAATGAAGGAGCAAGAATAGAAGAAGACAACAACGGAACAGACTGTGATATCATGGCTGAGGAGAATGATGATGATGGTGATGAAGAGAAAGCAAAGGATAATAATGAAGAAAGTGTTTCAACTAATAGAAGCACTAACGAAAGAAGAAGAACGGTGAGACAGTATGTTAGATCAAAGATGCCTCGCCTTCGATGGACTCCTGAACTTCATCTCTCCTTTGTTCAAGCTGTTGAAAAGCTTGGTGGTCAAGAGAGAGCCACACCCAAGTTGGTGCTTCAGCTAATGAATGTGAGAGGGCTTAGCATTGCTCATGTCAAGAGTCACTTGCAGATGTATCGAAGCAAGAAACTTGATGAGGCCGGGCAAGTTGTTGGTGGAACACACAGATCCACCCAAACGGAAGGTCTTGGGCCGAGACCTCATCAATATCTGAAGATGGGAAACGGTGGAATCATCCTCGCAAGTAATTGCAGCGACCAAACTAGTCTCTTTCTGCCCTCCTTCTTCGCCCCATCACCTCCACATCATACTACAAAGCCTACTCATTCATGGCAGCAATTACAGTGGCACTTGATGGATCATCAGCCTATAAACTCCAAGATAACGCACAAGAAACGCAGCACCGCCCAATTTCAGCTGGAAGAAAATAGGATGAACGCTCGTCAATGGAAGTTCAAAAGGTTTCCCACTAATGCCACCTCAAAACCAGATCAACATCATTCCAACTTCAAGCTGGATTTTGAGCCCCCGTTTCGGATCCAGCTGAATGAAGCGATGATGCGGCAAGAAAAGCAATGGCTGCCTGATCTGCAATTGGGGCTCAGTCTGGGAGGGGGCAAAGACCCCCAAGAAATTAGCACTGAGCTTTCACTTTCCTAG | 1212 | 0.4422 | MDAYGMEKTSNVKQAAVHDAIRSCSFVSVSGFLPHLLLLTSLLGVFPTRFVKVLFFLILDARKLSYLEHYYYRIMAMSSSEGIFQIEDKKNSRCTEETSLGSSQTCSSFDLNEGARIEEDNNGTDCDIMAEENDDDGDEEKAKDNNEESVSTNRSTNERRRTVRQYVRSKMPRLRWTPELHLSFVQAVEKLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDEAGQVVGGTHRSTQTEGLGPRPHQYLKMGNGGIILASNCSDQTSLFLPSFFAPSPPHHTTKPTHSWQQLQWHLMDHQPINSKITHKKRSTAQFQLEENRMNARQWKFKRFPTNATSKPDQHHSNFKLDFEPPFRIQLNEAMMRQEKQWLPDLQLGLSLGGGKDPQEISTELSLS | 403 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele16g1646 | 403 | Pfam | Myb-like DNA-binding domain | 174 | 224 | IPR001005 | - | |
Lele16g1646 | 403 | MobiDBLite | consensus disorder prediction | 143 | 162 | - | - | |
Lele16g1646 | 403 | Gene3D | - | 171 | 228 | - | - | |
Lele16g1646 | 403 | TIGRFAM | myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class | 172 | 227 | IPR006447 | GO:0003677 | |
Lele16g1646 | 403 | MobiDBLite | consensus disorder prediction | 124 | 142 | - | - | |
Lele16g1646 | 403 | FunFam | Myb family transcription factor | 170 | 228 | - | - | |
Lele16g1646 | 403 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE | 149 | 329 | - | - | |
Lele16g1646 | 403 | SUPERFAMILY | Homeodomain-like | 170 | 226 | IPR009057 | - | |
Lele16g1646 | 403 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 168 | 228 | IPR017930 | - | |
Lele16g1646 | 403 | MobiDBLite | consensus disorder prediction | 117 | 162 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele16g1646 | Lele-ChrLele16 | 9554918 | 9561289 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele16g1646 | 163 | 243 | G2-like Transcription Factor Family | AT2G42660 | 70.370 | 2.81e-33 | 123 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | GARP-G2-like | Lele16g1646 | Myb_DNA-binding | 3.3e-08 | CL0123 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lele16g1646 | 16 | 9554918 | 9561289 | Lele16g1646 | 16 | 9554918 | 9561289 | ECH | |
Lele15g1616 | 15 | 9604067 | 9606255 | Lele16g1646 | 16 | 9554918 | 9561289 | ECH | |
Lele13g0861 | 13 | 20195647 | 20197840 | Lele16g1646 | 16 | 9554918 | 9561289 | hybridization | |
Lele14g0759 | 14 | 18582119 | 18585908 | Lele16g1646 | 16 | 9554918 | 9561289 | hybridization |