Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1641 ATGTATCGATCAGTCCCACCTTTGACAGCCCTCGACAGGTTCTTATGGAACCAGCAAGCACAGAATCACAAGACTACCACCGTGTGGCCTAACACTACTGGAGGATCAAGTTTCATGGATGGGTTTGTGTTACCAAATGAGCAAGCTTTGAACTGGACACACTCTCAAGTTCCAGCACTGTGCTTCAGAAACAAAGTTTTCGGGAAGCATGATGACGACGTGGGAAGGAGAATCAATAAGAAAGGGTCTCGAGTGTCTTTGATCAAAGGACAGTGGACTGATGAAGAAGACGGGAAATTGGTGAGATTGGTGAATGAATATGGTGTGAAAAAATGGGCTGAAATTGCAGAGAAATTGGATGGAAGAGCCGGTAAGCAGTGTCGAGAGAGATGGCATAATCATTTGCGCCCTGATATTAAGAAAGACAGTTGGAGTGAAGAAGAAGAGAGGATTTTGGTGGAAACACATGCCAAGGTGGGGAATCGTTGGGCAGAAATAGCAAAGAGCATTCCGGGAAGAACAGAGAATGCAATCAAGAACCACTGGAATGCCACTAAAAGAAAGCAGAATTCAAAGAGAAAGAAGAAAATCACACACACAACAACAACACACAAAAAGCCACGTTCCTCTATACTCGAGGACTACATCAGAAGCACTGTCCAGAAGATTAACATTGCAGAAAACCGATCTGAACCCTCTTCTGAATCTGCTGCTGTTAATGACAACTCTGTAATAGCCGAACCATATGACGACGAATTGCTGTTCTTGCAAGCATTTCTTGCCGACAGTCAGAATCAGAAACAGTATCTTGCTGATGCTGAGCAGCACTCCGAGAATTCTTCAACTTCCTTCTTGTTGGACTTTTGTAAAACAGATGGTGAGCAGCATCTTATCAACATGACAACTGGGCCTGGATTTGTGTACTCCATTTCAAACCCAGCTAACAAAACAAGCTTCTATGAGAATCTCCTAACTGAGGAGGCTGCCACTTCCATTAAACACCCCCAATCTTCAGATCTTTATCTCTCTCACTTGCTCGATGGACCACCCTCCTCATCACTTCTGTGTGGCCATGGAAATCAAAACCTGAACATGAATTTGCTTATGGGGTATCTAGATAATAGTTCAGAACAAAAGCCAGAGATGGATTTGATGGAATTGGTTTCTTCAAAGTTTCCAACAAGCACCAACAGTAGCATTTGA 1203 0.4339 MYRSVPPLTALDRFLWNQQAQNHKTTTVWPNTTGGSSFMDGFVLPNEQALNWTHSQVPALCFRNKVFGKHDDDVGRRINKKGSRVSLIKGQWTDEEDGKLVRLVNEYGVKKWAEIAEKLDGRAGKQCRERWHNHLRPDIKKDSWSEEEERILVETHAKVGNRWAEIAKSIPGRTENAIKNHWNATKRKQNSKRKKKITHTTTTHKKPRSSILEDYIRSTVQKINIAENRSEPSSESAAVNDNSVIAEPYDDELLFLQAFLADSQNQKQYLADAEQHSENSSTSFLLDFCKTDGEQHLINMTTGPGFVYSISNPANKTSFYENLLTEEAATSIKHPQSSDLYLSHLLDGPPSSSLLCGHGNQNLNMNLLMGYLDNSSEQKPEMDLMELVSSKFPTSTNSSI 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1641 400 PANTHER MYB PROTEIN-RELATED 81 226 - -
Lele16g1641 400 CDD SANT 92 135 IPR001005 -
Lele16g1641 400 Gene3D - 88 140 - -
Lele16g1641 400 ProSiteProfiles Myb-like domain profile. 84 135 IPR001005 -
Lele16g1641 400 FunFam Transcriptional activator Myb isoform A 88 141 - -
Lele16g1641 400 SUPERFAMILY Homeodomain-like 86 182 IPR009057 -
Lele16g1641 400 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 84 139 IPR017930 -
Lele16g1641 400 Gene3D - 142 213 - -
Lele16g1641 400 CDD SANT 143 186 IPR001005 -
Lele16g1641 400 Pfam Myb-like DNA-binding domain 92 149 - -
Lele16g1641 400 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 140 190 IPR017930 -
Lele16g1641 400 MobiDBLite consensus disorder prediction 185 208 - -
Lele16g1641 400 MobiDBLite consensus disorder prediction 185 203 - -
Lele16g1641 400 ProSiteProfiles Myb-like domain profile. 136 186 IPR001005 -
Lele16g1641 400 SMART sant 140 188 IPR001005 -
Lele16g1641 400 SMART sant 88 137 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1641 Lele-ChrLele16 9519871 9521933 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1641 4 389 MYB Transcription Factor Family AT5G11050 38.005 4.16e-75 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele16g1641 Myb_DNA-bind_6 3.3e-18 CL0123