Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1640 ATGGGAGCTAAGGTTATAGACTCCTATTTCTGTAGATTCTGGATTCTTCTGGCGTTGTTTGCTGTTGTGGATTCTTCCTGCAACAGCACCGACCATGAGTTGGTCTCGAAGGCCTTTCAATCTGTCTCTGGCTTCAATGTTTCTTGGTTCCATACTCAGGGTTCAAACTGTTCGAAAGCTTCTCAGATTACTTCAATACAGCTTTCTTCCAGGAATCTGAGTGGGGCTATCTCTTGGGCTTTTATCAGGAACATGTCCAACTTGCAGGTTCTCGATCTTTCTGGGAATTTTCTCCAAGGCCAGGTACCTCGCTGGTTTTGGGAATCTCCCGGATTATCGAAAGTTGATCTTTCTAATAACAAGTTTGGAGGGAGCCTTGAGCTCGAATATTCCCCCACAGGAAACTCCTCTTTTTCTTCATTGCTTCAAAGTCTCAATCTCTCTCACAACAGGTTCACCAATCTGCTTCAACTCTCTGGGTTCTCAAACCTCGAAATTCTCGACCTTTCGTATAACAATTTGAGGACTCTCCCTTCTGGGCTTCGAAATCTCACCGGGCTTCACCATCTCGACCTCTCTAGCTGCAATATCAAAGCAAACGTAAAACCCATTTCTGCTCTGCGCTCGCTGAATTACTTGGACTTGTCAAACAACGCTTTCAATGGTAGTTTCCCTTCCGATTTCCCTCCCCTGCAAAAGCTCAAGTTCTTCAACATTTCTTACAACAACTTCACAGCACTGGTTCACTTAGATGAGTACAAGAAATTTGGTAACTCAGCTTTCATTGACGCCGGAAACTACTGCGCTCGCAATACATCTAAATCTAATACCCCCAGTCTTGATCCACCTACTCATGCTTTAAAAGCCTCGACGCACCACAACAAACACAAGCACAAAACTCTGGTTGTGGCGGTGTCCTCTGCTTCAGCATTTGTGCTGGTTCTATTGAGTATATGGGTGTTTTGTATTTACAGAAAGAAGAGACAACTGGCGAAGAAAATGAAATGGGCAATCTCGAAGCCGGTGCCTTTGGGAATAAAGTCGGACAAATCTGGGCCTTTCGCGTTCGAAACGGAGTCAGGAAGCTCGTGGGTGGCGGATTTGAAGGAGCCATCGTCGGCACCGGTGGTGATGTTCGAGAAGCCGTTGATGAACCTGAGCTTCAAGGACCTGATAGCAGCCACGTCACACTTCGGCAAAGAGTCGCTGCTGGCGGAGGGAAGGTGTGGGCCAGTGTACAGAGCCGTCGTCATCCCCGGTGACGTCCACGTGGCAATCAAGGTGCTGGAGAATGCAAGAGAAGTCGATAGCGATGACGCCATCGCGCAGTTCGTTGACCTGTACAAGCTCAAACACCCCAATTTATTGCCACCCTCCGGATACTGCATTGCAGGTAGTGAGAAGCTGATTTTGTACGAGTTTATGTCAAACGGCGATTTGGGTAGGTGGCTCCATGAGCTGCCAACGGGACAAACCAACGTGGAGGATTGGACCGGTGACACGTGGGAGATTCAAAATGGCTCCGGATCGCATGTTCCATCCCGGCCGGAGAAGATGAATTGGCTTACACGACACCGTATTTCCGTCGGGATTGCGCGGGGGCTAGCGTATCTTCATCACGCAGGTCCAAAGCCCGTCGTCCACGGCCACCTAGTGACTTCAAATATCTTGCTCGCCGACGACTTGGAGCCCCGGATCGCCGATTTCGGGATCCGAAACATCGGGAAGGAACCACAGAGCCCGAATTGCAGCACAGAGACGGACGTTTACTCCTTCGGGGTGGTGCTGGTGGAGCTGTTGACGGGAAAACCTGGCACGGCGGAGACGGTGGTTCGGGTGAGAAAGGCGGTGAGGGAGGGGCAGGGGGAGCGCGCGTTGGACGAGAGGCTAACCCTGAGCTGCGACTGGGAAAACGAGATGCTGGAGAGCCTGCGAGTCGCGTACTTGTGTACGGCCGAGTCACCGGGCAAAAGGCCCACCATGCAACAGGTTTTGGGTTTGCTCAAAGACATTCACCCGCACGACCCGACTTGA 2034 0.5079 MGAKVIDSYFCRFWILLALFAVVDSSCNSTDHELVSKAFQSVSGFNVSWFHTQGSNCSKASQITSIQLSSRNLSGAISWAFIRNMSNLQVLDLSGNFLQGQVPRWFWESPGLSKVDLSNNKFGGSLELEYSPTGNSSFSSLLQSLNLSHNRFTNLLQLSGFSNLEILDLSYNNLRTLPSGLRNLTGLHHLDLSSCNIKANVKPISALRSLNYLDLSNNAFNGSFPSDFPPLQKLKFFNISYNNFTALVHLDEYKKFGNSAFIDAGNYCARNTSKSNTPSLDPPTHALKASTHHNKHKHKTLVVAVSSASAFVLVLLSIWVFCIYRKKRQLAKKMKWAISKPVPLGIKSDKSGPFAFETESGSSWVADLKEPSSAPVVMFEKPLMNLSFKDLIAATSHFGKESLLAEGRCGPVYRAVVIPGDVHVAIKVLENAREVDSDDAIAQFVDLYKLKHPNLLPPSGYCIAGSEKLILYEFMSNGDLGRWLHELPTGQTNVEDWTGDTWEIQNGSGSHVPSRPEKMNWLTRHRISVGIARGLAYLHHAGPKPVVHGHLVTSNILLADDLEPRIADFGIRNIGKEPQSPNCSTETDVYSFGVVLVELLTGKPGTAETVVRVRKAVREGQGERALDERLTLSCDWENEMLESLRVAYLCTAESPGKRPTMQQVLGLLKDIHPHDPT 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1640 677 Gene3D Transferase(Phosphotransferase) domain 1 475 580 - -
Lele16g1640 677 Gene3D Transferase(Phosphotransferase) domain 1 581 675 - -
Lele16g1640 677 Pfam Leucine rich repeat 62 122 IPR001611 GO:0005515
Lele16g1640 677 Pfam Leucine rich repeat 142 197 IPR001611 GO:0005515
Lele16g1640 677 FunFam Calmodulin-binding receptor kinase CaMRLK 140 250 - -
Lele16g1640 677 Gene3D Ribonuclease Inhibitor 26 132 IPR032675 -
Lele16g1640 677 Gene3D Phosphorylase Kinase; domain 1 358 474 - -
Lele16g1640 677 Pfam Protein tyrosine and serine/threonine kinase 402 573 IPR001245 GO:0004672|GO:0006468
Lele16g1640 677 FunFam Putative LRR receptor-like serine/threonine-protein kinase 359 474 - -
Lele16g1640 677 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 45 671 - -
Lele16g1640 677 ProSiteProfiles Leucine-rich repeat profile. 163 185 IPR001611 GO:0005515
Lele16g1640 677 Gene3D Ribonuclease Inhibitor 133 263 IPR032675 -
Lele16g1640 677 ProSiteProfiles Protein kinase domain profile. 398 675 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele16g1640 677 SUPERFAMILY L domain-like 50 247 - -
Lele16g1640 677 SUPERFAMILY Protein kinase-like (PK-like) 388 672 IPR011009 -
Lele16g1640 677 SMART LRR_typ_2 161 184 IPR003591 -
Lele16g1640 677 SMART LRR_typ_2 207 230 IPR003591 -
Lele16g1640 677 SMART LRR_typ_2 85 108 IPR003591 -
Lele16g1640 677 ProSiteProfiles Leucine-rich repeat profile. 141 162 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1640 Lele-ChrLele16 9514920 9517409 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1640 63 671 Receptor kinase-like Gene Family AT5G07280 30.675 3.13e-71 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Lele16g1640 PK_Tyr_Ser-Thr 4.9e-20 CL0016