Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1616 ATGGAGCGAAGGTTCAACAGCAGCAACCTAAATATCAGTGAACAAGATGACACTGATATAGCTCAAGAAAACGTTGCAGAGTCCCCTCCTTCCGCTGTCTCCAATATCGATAGCTTCTTCGTCCCTTCTAAGTCTTCCACTAAAAGAAGGCGAGCCATACAGAAGAGGGTAGTGCACATTCCAATCAAGGAAGTAGAAGGATCTCGGCTTAAAGGAGAGAGCAATACTCCGCCGTCTGATTCCTGGGCTTGGAGAAAGTACGGTCAAAAACCCATCAAAGGTTCGCCTTATCCCAGAGGATATTATCGATGCAGCAGTTCAAAGGGATGCCCCGCAAGAAAACAAGTGGAAAGGAGCAGCGTGGACCCCACCATGATCGTCGTCACATACTCTTGCGAGCACAATCACCCTTGGCCGGCTTCTCGGAATCATCACCACAACAAATCCGCCTCCAACAAAGCCATCGCCCAAGCCGAACCCGTCGGGGCCCGGGTCGAGCAGGAACAGGAGCCAGAACCGGAGTCTGAGGAGAAGTTCGGGAAGCTCGGGGACGGGTCATTGATGAGCACAGCGGACGAGTTGGGTTGGTTCGGCGAAATGGAGAGGACGGCAACGACGTCATCGGCTGTTCTGGAGAGCACAATTCTGACAGGGGACGACACGGACGTAGCTTCCATGTTCTTGCCGATGAGGGAGGAGGACGAGTCACTGTTCGCGGACCTGGGGGAGCTGCCGGAGTGCTCGGTGGTGTTCAGGCGAGTGAGGATGGAAAGGGAGGAGGAGAGGCGGCGGTGTGCGGAGCCGTGGTGTGGGACCACGAGTTGA 825 0.5491 MERRFNSSNLNISEQDDTDIAQENVAESPPSAVSNIDSFFVPSKSSTKRRRAIQKRVVHIPIKEVEGSRLKGESNTPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSSVDPTMIVVTYSCEHNHPWPASRNHHHNKSASNKAIAQAEPVGARVEQEQEPEPESEEKFGKLGDGSLMSTADELGWFGEMERTATTSSAVLESTILTGDDTDVASMFLPMREEDESLFADLGELPECSVVFRRVRMEREEERRRCAEPWCGTTS 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1616 274 MobiDBLite consensus disorder prediction 139 185 - -
Lele16g1616 274 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 23 249 IPR044810 GO:0003700
Lele16g1616 274 SMART WRKY_cls 78 138 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele16g1616 274 SUPERFAMILY WRKY DNA-binding domain 76 139 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele16g1616 274 MobiDBLite consensus disorder prediction 165 181 - -
Lele16g1616 274 MobiDBLite consensus disorder prediction 1 38 - -
Lele16g1616 274 FunFam WRKY transcription factor 65 62 139 - -
Lele16g1616 274 Pfam WRKY DNA -binding domain 80 137 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele16g1616 274 ProSiteProfiles WRKY domain profile. 79 139 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele16g1616 274 Gene3D WRKY domain 68 140 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1616 Lele-ChrLele16 9389511 9390855 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1616 16 252 WRKY Transcription Factor Family AT1G29280 54.286 6.80e-80 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele16g1616 WRKY 2e-25 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g0885 13 20342676 20343980 Lele16g1616 16 9389511 9390855 hybridization