Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1607 ATGATGAGGTGGGGTCGGAAAAAATCTTCTTCTGCTTCTTCTTCTTCTTCATCTAGACCTTCATCTATCTCTCATCTCTCTCTTCTTTCATGGCTGTCCAAGTTCAGGCACATGAGGATCAATACAGAGGCAAGTGATGGGAAAGTGAAGCAGAAGGGAAAGCCAAAAAATTCTCATTCCGTCAGTTCATCACAGTATGCTTGTGGGATTGGAGGTGGTAAGTCGTCTCTTAGTGGGGATGATTATGATGAGGGTTCCTGTAGACTTCCATTTGGTGAAGAGAGTCATGAGAAAAAGAGAAGCAAGGATGTTCTTGAAACGGAGTTGAGCAATCTGGTTGATGATGATCTTGTTGTTGCAGTCTCTAGTTGCAGTAGTGTCGGATGGAATGGCAGGAAACATGGAAGAAAAGAAGGAACTCTCAAGTTCAAGGAGAAGAAGGAGATATGTACAGAAGAGGAAGAAGAAAGTAAATTTCCAGAAGATCACAAGATTTCACTGGAGATAGATGATTATGATCGAGAAAAAGAACTAGACAAGTTAAGGACGACTTTTGAGAATAAAGCACAGAAAGTTTTGCGTGAGAGATTGTTGAAACTTGAGAAAGTTACTGATAAAGCTGAATCTGCATCTACCAAATCAGTAGAAAAAGATGTGATACAACTTGAGTCACCTAGGACAATTTGTACTCCCAGAAAACATTCTCTTGTTGCTTCATTGTCTTCTAAGAATCCCAGCCTTAGAAGTATCAAAACTGGGACTCGATCCTCTGAGGGAAAACTGGGAATCGAGAAGCAGCATTTGAAAAAGAATGAGATGAAGACAAGGAAGCCAAAGCACAGCTCAAAGGTGAGGGTATATTCTCCAAGGATGGGTTCCAAGACTGAAGTCTGCAAAATAAACGCTCTGGAAGACTTGAAGAAAGAGAAACTGAAGATGAAGAAGGCAAAGGAGAGAATAATGATGGAAAAAACAGAAGTATTGGATAGCTTTGCTGTGGTGCGATGTTCATTGAATCCAGAGAAGGACTTCAGAGATTCAATGGTTGAGATGATCACAGAGTTACATATTCATCAGCCGGAAGAATATGAAGAGCTTTTGACATATTATCTCACCCTGAATTCTGATGAATATCACGACCTCATTATCAAAGTATTCCGCGAGGTATGGTTTGATATGAACAAAAATATTCTGGGTATTTCGTTACAGGTGCAATATGGCCAATTATGA 1230 0.4008 MMRWGRKKSSSASSSSSSRPSSISHLSLLSWLSKFRHMRINTEASDGKVKQKGKPKNSHSVSSSQYACGIGGGKSSLSGDDYDEGSCRLPFGEESHEKKRSKDVLETELSNLVDDDLVVAVSSCSSVGWNGRKHGRKEGTLKFKEKKEICTEEEEESKFPEDHKISLEIDDYDREKELDKLRTTFENKAQKVLRERLLKLEKVTDKAESASTKSVEKDVIQLESPRTICTPRKHSLVASLSSKNPSLRSIKTGTRSSEGKLGIEKQHLKKNEMKTRKPKHSSKVRVYSPRMGSKTEVCKINALEDLKKEKLKMKKAKERIMMEKTEVLDSFAVVRCSLNPEKDFRDSMVEMITELHIHQPEEYEELLTYYLTLNSDEYHDLIIKVFREVWFDMNKNILGISLQVQYGQL 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1607 409 Coils Coil 299 326 - -
Lele16g1607 409 MobiDBLite consensus disorder prediction 1 24 - -
Lele16g1607 409 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 170 393 IPR038933 GO:0045892
Lele16g1607 409 ProSiteProfiles OVATE domain profile. 333 392 IPR006458 -
Lele16g1607 409 MobiDBLite consensus disorder prediction 244 283 - -
Lele16g1607 409 MobiDBLite consensus disorder prediction 42 67 - -
Lele16g1607 409 MobiDBLite consensus disorder prediction 7 24 - -
Lele16g1607 409 Pfam Transcriptional repressor, ovate 337 393 IPR006458 -
Lele16g1607 409 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 332 393 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1607 Lele-ChrLele16 9343082 9344311 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Lele16g1607 Ovate 1.1e-20 No_clan