Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1599 ATGTTGCGTTCTTTCAGTTTCATTCAACGAGTTCCCTTGCGGGTGGTTCTTGCTGCTTCCCAGAGCAATATGCAGGCTGTCAACTTCCTTGAGCTCTTTCTATTGGCATTCACTTGTTTCCAGTTGCTGGGAATTTCTCATGAGTCTAAGTTACCTCATGATGAAGTTCTTGCTCTTCAAGAAATTACAAGAACAATGGGAGCAAACAATTGGAAGTTTAATGATTCCTGCGGAATTGATACAGTTGGAGTAACACAGGAACTCTCTCCTGGATCAGAGAGAAGACTAGTTTGTGACTGCAGTTTTGAAAACAACACAGTCTGCCATGTTGTAAATATGACTCTCAAGCGCCTTAGCCTGCCTGGCATACTTCCACCTCAACTGGTCAAGCTACCCTATCTTCGAGAAATAGATTTTGCTTACAATCTCTTTACTGGCACTATCCCAAAGGAATGGTCTTCGATGAATCTAACTTCAATCTCTCTTCTTGTGAACCGCTTATCAGGGGAAATTCCTAAGCATCTGGGAAATATTACTACTCTCACATACCTGATGCTTGAAGCAAACCAATTTTCTGGTGTCATTCCTCCTGAGCTCGGGAGTCTAATCAACTTGCAGACGTTGGTACTGTCATCCAATCAATTGACTGGGAGCTTACCAGGGACACTTGCTGGGTTGCACAATTTGATTGACTTTAGGATAAATAATAACAACTTCAATGGAACTATACGTAACTTTATACAAAACTGGAGGCTTCTCCAAAGACTAGAAATGCATGCAAGTGGACTAAAAGGACCAATCCCACCAAATATATCACTTTTGGAGAACTTAGTTCAGTTGAGAATCAGCGACATAAGTAGTCCAAGTCAAGGTTTTCCTTTGCTAGAAAAGATGCCATACATGGAAACATTAGTTTTGAGGAACTGCAACCTTACTGGGGAGATACCTACATACATCTGGACAATGACGAATTTGATAACATTGGATGTCAGTTTTAATAAGATAGTTGGGCACATTCCGGCAGTTATAAACAACAGACGTCTGAGATATGTGTACCTTACAGGAAATATGCTAAGTGGAAATGTACCAAAAATCTTGAAGGGTGGAAGTAGCATTGATCTTTCATACAACAACTTTACTTGGCAGGGCCCCGAGCAACCAGCTTGTCAGGATAACATGAACTTGGATCTGAATTTGTTCAGAAGCTTTAAAAAGAAGAACAAGTTAGAAGAATATGTCCCTTGCTTAGAGAATTTCAGTTGTCAACAGTATTCAACTTGCTTACACATAAATAGTGGTGGGATGGATGTAAAGGTGAAAGAAAATAATGGAGAAAGCCTTTATTTAGGGGATGGAAATGTTGGTGGCGGTACTGCAACATACTATTATAGCAACAGTGATAATTGGGGGTTCAGTAGTACTGGAGACTTCATGGATGATTTTGACTACCAGAACATAAGATACACCGTATCTCAGCCATCTTCAAATATGCCTGAGTTATATTCGACAGCTCGTATATCTCCACTTTCACTTACTTATTTCCATAATTGCATGGAAAATGGGAACTACACTGTAAATCTCCACTTCTCTGAAATACAGTTCACAAATGATAATACATATGCAAGTCTTGGGAAGCGCATATTTGATATCTATGTTCAGGAACAATTAATTTGGAAGGATTTTAATATTGAGAGTGAGACAAATGTTGCTCGAAAACTACTGATACTGCCAATATACAATGTCAGCATCACCGATCATGTCTTGGATATTCGGTTCCAATGGGCTGGAAAGGGAACAACTAGAATTCCAGATATAGGAGTTTATGGTCCCATTGTGTCAGCATTGTCTTTGGTTTCTGATTCGAGACCTTGCTCAAATGGTAGAAAGAATGGCGCAGTTAGTAAATTCATTGCAATTGGAATCGCCGCTCTATGCTTAGTGCTTTTAATGGCAGGGATCATTTGGTGGAAAGGCTGTTTCAGAGGAAAACTCAAAAAGACAGAAGATATTCAGACAGGAACTTTCAGCTTCAAACAGATGAGAGCAGCCACTGATGACTTCTCGTATGATAACAAAATTGGGGAAGGCGGTTTTGGTGCTGTATACAAGGGACAGTTACCTGATGGTACTTTTATAGCAGTCAAGCAACTATCATCCATGTCGCGGCAGGGCAATCGCGAATTTCTAAATGAAATAGGCCTAATATCTTGTTTGCAACATCCTAACCTTGTGAAACTCCATGGATCTTGCATTGAAGGGGATCAACTACTATTGGTATACGAGTACATGGAAAATAATAACCTCGCCCGTGCTTTATTTGGCAATGAAAACAATCGGATTCAACTGGATTGGCCCACAAGAGCTAGGATATGCATTGGCATTGCAAAAGGTCTTGCATTCCTTCACGAAGAGTCAAGGCTCAAGATTGTGCACAGAGATATCAAGGCTACTAATGTGTTACTAGATGAAAATTTAAATCCTAAAATATCAGATTTTGGTTTGGCTAAGCTTGACGAAGGAGAGAAGACACACATCACGACTCGAGTTGCGGGAACCATAGGATATATGGCTCCGGAATATGCGTTATGGGGCCATCTAACATACAAGGCAGATGTTTACAGTTTTGGTGTCTTGGCCCTAGAAATTGTTACTGGCAAAAGCAATAACAATTATGTGCCAGATAATGGCTCTGTTTGTCTTCTAGATTGGGCATGTCAGTTGCAACAAGGTGGAAAGTTACTGGAGCTGGTAGACGAAAGAATGGGTTCAAACGTTAATGAAAGGGAAGCAGAAAAAGTGCTGAAAGTGGCTCTTCTGTGCACAAATGCATCCCCATCACTTAGGCCGACAATGTCTGAGGTTGTAAATATGCTTGAAGGACAAATGGATATTCCAGATGTAGTTCCAGAACCAGGTGCTTACTATGAAGATTTGAGGTTTAAAGCCTTGAGAGATCTTGATCAATGGTCAAAGCAGAGTTTCAATGGAAGCCAGACTCAATCTTCAGTTTCAATCCATACCTTCAGCTTAGAATCTGGAAATACAATAACAGCTTCTTCTACGGATCATCAGTTAGCCCACAAAAGTGAGATTTCAACTTCAAAGGCAAGTTCAACACCCTGA 3123 0.4041 MLRSFSFIQRVPLRVVLAASQSNMQAVNFLELFLLAFTCFQLLGISHESKLPHDEVLALQEITRTMGANNWKFNDSCGIDTVGVTQELSPGSERRLVCDCSFENNTVCHVVNMTLKRLSLPGILPPQLVKLPYLREIDFAYNLFTGTIPKEWSSMNLTSISLLVNRLSGEIPKHLGNITTLTYLMLEANQFSGVIPPELGSLINLQTLVLSSNQLTGSLPGTLAGLHNLIDFRINNNNFNGTIRNFIQNWRLLQRLEMHASGLKGPIPPNISLLENLVQLRISDISSPSQGFPLLEKMPYMETLVLRNCNLTGEIPTYIWTMTNLITLDVSFNKIVGHIPAVINNRRLRYVYLTGNMLSGNVPKILKGGSSIDLSYNNFTWQGPEQPACQDNMNLDLNLFRSFKKKNKLEEYVPCLENFSCQQYSTCLHINSGGMDVKVKENNGESLYLGDGNVGGGTATYYYSNSDNWGFSSTGDFMDDFDYQNIRYTVSQPSSNMPELYSTARISPLSLTYFHNCMENGNYTVNLHFSEIQFTNDNTYASLGKRIFDIYVQEQLIWKDFNIESETNVARKLLILPIYNVSITDHVLDIRFQWAGKGTTRIPDIGVYGPIVSALSLVSDSRPCSNGRKNGAVSKFIAIGIAALCLVLLMAGIIWWKGCFRGKLKKTEDIQTGTFSFKQMRAATDDFSYDNKIGEGGFGAVYKGQLPDGTFIAVKQLSSMSRQGNREFLNEIGLISCLQHPNLVKLHGSCIEGDQLLLVYEYMENNNLARALFGNENNRIQLDWPTRARICIGIAKGLAFLHEESRLKIVHRDIKATNVLLDENLNPKISDFGLAKLDEGEKTHITTRVAGTIGYMAPEYALWGHLTYKADVYSFGVLALEIVTGKSNNNYVPDNGSVCLLDWACQLQQGGKLLELVDERMGSNVNEREAEKVLKVALLCTNASPSLRPTMSEVVNMLEGQMDIPDVVPEPGAYYEDLRFKALRDLDQWSKQSFNGSQTQSSVSIHTFSLESGNTITASSTDHQLAHKSEISTSKASSTP 1040
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1599 1040 Pfam Malectin domain 427 615 IPR021720 -
Lele16g1599 1040 ProSiteProfiles Protein kinase domain profile. 687 964 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele16g1599 1040 Gene3D Phosphorylase Kinase; domain 1 660 762 - -
Lele16g1599 1040 Pfam Protein tyrosine and serine/threonine kinase 689 958 IPR001245 GO:0004672|GO:0006468
Lele16g1599 1040 Gene3D Ribonuclease Inhibitor 219 288 IPR032675 -
Lele16g1599 1040 Gene3D Ribonuclease Inhibitor 58 218 IPR032675 -
Lele16g1599 1040 Gene3D Ribonuclease Inhibitor 289 409 IPR032675 -
Lele16g1599 1040 CDD STKc_IRAK 693 960 - -
Lele16g1599 1040 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 425 620 - -
Lele16g1599 1040 ProSitePatterns Protein kinases ATP-binding region signature. 693 715 IPR017441 GO:0005524
Lele16g1599 1040 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 38 996 - -
Lele16g1599 1040 MobiDBLite consensus disorder prediction 1020 1040 - -
Lele16g1599 1040 SUPERFAMILY Protein kinase-like (PK-like) 670 961 IPR011009 -
Lele16g1599 1040 SMART serkin_6 687 958 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele16g1599 1040 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 57 219 - -
Lele16g1599 1040 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 660 762 - -
Lele16g1599 1040 SUPERFAMILY L domain-like 105 363 - -
Lele16g1599 1040 FunFam Putative LRR receptor-like serine/threonine-protein kinase 763 970 - -
Lele16g1599 1040 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 288 408 - -
Lele16g1599 1040 Gene3D Transferase(Phosphotransferase) domain 1 763 966 - -
Lele16g1599 1040 Gene3D - 423 621 - -
Lele16g1599 1040 ProSitePatterns Serine/Threonine protein kinases active-site signature. 809 821 IPR008271 GO:0004672|GO:0006468
Lele16g1599 1040 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 220 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1599 Lele-ChrLele16 9298261 9306710 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1599 27 853 Receptor kinase-like Gene Family AT1G29750 57.674 0.0 988
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele16g1599 PK_Tyr_Ser-Thr 1.7e-48 CL0016