Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1596 ATGACATATTTCAATGGAATAATGCATTTTGATCTGGTTGACTCTGCTAATATGCTTACCAACTACATGGGCACTAGTTACTTGCTCGCCATCCTCGTCGCCGTGGTAGCTGACACCTGGTTCGGCAGATTCAAAGCCGTCACCGTGTCCGGTTGCTTTGAGTTTTTGGGATTCTTACTGCTAACAGTACAAGCACACTACCCACACCTGAAGCCACCACCATGCTTGATGTTGGATCCACGATCTCACTGTGAAATTCTCAGTGGCAGCAACAAGGCTCTTCTCTTTGTCGGTCTCTATCTCCTGGCCTTCGGAAGCGCGGAATCAAAGCTTCCCTTCCATCTCATGGCGCCGATCAGTTCGACGAGAAAGGTCTTTGTTGCAGCATTTCTGAACATAAATCTTCCCCTTCCTGAAGATCCTGCAGAACTCTACGAGATTGAACTGGACAAAGAAGCTGCCTCAGAAATAGAATTTTTACTTCACACAGACATTTACAGTCTTCAACTAGCTGTATATGTGCAAGCATTGGTTCTAAAAAGAGCTCCTGTTCCCATCTTATATTATCAGAGTGAATTTATTAAGGTTTGGTGTTTAATGGAACCGAAAAACCCAGCCAGGTTTACGCTGGGGAGGCAGTCATCGCTGGCCCCGGAAAGACATAGCGACGAATCGGAGCTGCATCCAGAGGGGGATGGCCTTCAAGGTATGGATCCGGGATTTAGGCTGATGTGTTTGGCCAATGAAGGCGATCTGGATGGTATTCGTGAGCTAGCAAATACGGGGGTTAGTGTGAACTACAGAGATATTGATAATCGCACTCCTCTTCATGTTGCGGCCTGTCAGGGATTGACTGATGTGGTTGCTCTGTTGCTCGAAAAAGGGGCTGTGGTTGACCCACAAGATCGCTGGGGGAGCACGCCTCTTGCAGATGCCATACATTATAAAAACAACGATGCGATCAAATTATTGGAGAAGCATGGAGCAAAGCCTCTGGTGGCCCCTATGCATGTTAACCATGCACGGGAAGTACCAGAATATGAAATTGATCCTAAGGAGCTTGATTTTACCAATAGTGTGGAGATAAGTAAGGGAACTTTCTGTAGTGCATTGTGGCGTGGAACAGAGGTTGCTGTGAAAAAGCTTGGGGATGATGTCATTACTAATGAGGAGAAAGTGAAGGCCTTTAGAGATGAGGTTGCTTTGTTTCAGAAGATTCGGCACCCTAATGTAGTCCAGTTTCTGGGTGCTGTGACTCAGAGCAGTCCAATGATGATTGTGATAGAATATCTTCCCAAGGGAGATCTTCGTGCATTCTTGAAAAGAAAAGGAGCCGTGAGACCAACAGCAGCAGTGAGATTTGCTCTTGATATTGCTAGGGGAATGAACTATTTGCATGAAAATAAGCCATCTCCAATAATTCATCGTGATCTTGAACCCTCTAATATATTGCGGGATGATTCGGGCCACCTAAAAGTTGCAGACTTTGGGGACAGCAAATTGCTGGCAGTTAAAGAAGACAAGCCTCTAACCTCCCAAGAGACTTCTTGCCGCTATGTGGCTCCAGAGGTTTTCAATCAAGAAGAGTATGACACCAAAGTGGATGTTTTCTCATTTGCTTTAATTCTGCAAGAGATGATAGAGGGATGCCCCCCATTTTTAACAAAGCAAGATGATGAGGTTCTTAAGGCATATGCTGCAAAAGAGCGTCCTCAGTTCAGCGCTCCAGCCAAGCGTTATGCCCATGGACTGAGAGCATTGATTGAAGAGTGCTGGAATGAGAATCCAGCAAAGAGGCCAACATTTAGGCAAATAATAACAAGGCTTGAATCCATGTACAGCACACTTGCTCATAAAAAGCGATGGAAGGTTAGGCCACTGAAATGCTTCCAGAATCTGGAAGCTATGTTGAAGAGAGATCACACAAATCTAAGCAGTCCCAGCGGCTCATCTCGTTCTACAGCCAGCAGTTTATGA 1977 0.4557 MTYFNGIMHFDLVDSANMLTNYMGTSYLLAILVAVVADTWFGRFKAVTVSGCFEFLGFLLLTVQAHYPHLKPPPCLMLDPRSHCEILSGSNKALLFVGLYLLAFGSAESKLPFHLMAPISSTRKVFVAAFLNINLPLPEDPAELYEIELDKEAASEIEFLLHTDIYSLQLAVYVQALVLKRAPVPILYYQSEFIKVWCLMEPKNPARFTLGRQSSLAPERHSDESELHPEGDGLQGMDPGFRLMCLANEGDLDGIRELANTGVSVNYRDIDNRTPLHVAACQGLTDVVALLLEKGAVVDPQDRWGSTPLADAIHYKNNDAIKLLEKHGAKPLVAPMHVNHAREVPEYEIDPKELDFTNSVEISKGTFCSALWRGTEVAVKKLGDDVITNEEKVKAFRDEVALFQKIRHPNVVQFLGAVTQSSPMMIVIEYLPKGDLRAFLKRKGAVRPTAAVRFALDIARGMNYLHENKPSPIIHRDLEPSNILRDDSGHLKVADFGDSKLLAVKEDKPLTSQETSCRYVAPEVFNQEEYDTKVDVFSFALILQEMIEGCPPFLTKQDDEVLKAYAAKERPQFSAPAKRYAHGLRALIEECWNENPAKRPTFRQIITRLESMYSTLAHKKRWKVRPLKCFQNLEAMLKRDHTNLSSPSGSSRSTASSL 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1596 658 Gene3D Transferase(Phosphotransferase) domain 1 432 650 - -
Lele16g1596 658 SUPERFAMILY Protein kinase-like (PK-like) 357 610 IPR011009 -
Lele16g1596 658 Gene3D Phosphorylase Kinase; domain 1 348 431 - -
Lele16g1596 658 ProSiteProfiles Ankyrin repeat profile. 271 303 IPR002110 GO:0005515
Lele16g1596 658 ProSiteProfiles Ankyrin repeat region circular profile. 271 303 - -
Lele16g1596 658 SUPERFAMILY Ankyrin repeat 243 332 IPR036770 -
Lele16g1596 658 FunFam Integrin-linked protein kinase family 220 347 - -
Lele16g1596 658 Gene3D MFS general substrate transporter like domains 1 110 IPR036259 -
Lele16g1596 658 FunFam serine/threonine-protein kinase STY46-like 349 432 - -
Lele16g1596 658 MobiDBLite consensus disorder prediction 214 235 - -
Lele16g1596 658 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 295 612 - -
Lele16g1596 658 MobiDBLite consensus disorder prediction 217 231 - -
Lele16g1596 658 ProSiteProfiles Protein kinase domain profile. 356 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele16g1596 658 Pfam Protein tyrosine and serine/threonine kinase 373 609 IPR001245 GO:0004672|GO:0006468
Lele16g1596 658 FunFam Os01g0748600 protein 342 629 - -
Lele16g1596 658 SMART ANK_2a 304 333 IPR002110 GO:0005515
Lele16g1596 658 SMART ANK_2a 235 267 IPR002110 GO:0005515
Lele16g1596 658 SMART ANK_2a 271 300 IPR002110 GO:0005515
Lele16g1596 658 Pfam Ankyrin repeats (3 copies) 244 331 IPR002110 GO:0005515
Lele16g1596 658 CDD STKc_MAP3K-like 362 609 - -
Lele16g1596 658 Gene3D - 214 346 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1596 Lele-ChrLele16 9275720 9284342 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1596 207 630 MAP Kinase Kinase Kinase AT4G18950 66.901 0.0 598
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Lele16g1596 PK_Tyr_Ser-Thr 1.8e-53 CL0016