Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1585 ATGCATCATGCACATATAGTTGTTGGTTTGTGGTCTTCTGCATGGCCAAGAGCACAGTTTTTCAAGCCTTTCGTTTTAAACTCGTCCATGCCTTTTTGCTATAAGCTTATATCTCTTCCGCAAGTGGCTCCTTCGCTTCGATTCTCTTCTCCAAGACGCGCACTCCGCGACAGTGCGGTTCTTGATGTGCGTGAAATCATCTTGAAAGATTTGCATTCTGCTCATAATAAGGCCAAGCAAATGTCAGGGAACAATTATAACTGCAGTCCTACTCCTACTACACCCACATCAAGATTAGAAAGGCTTCTGAGGGAAAGAGCGCTAAGGAAATCCAACAAGCATTCTCAACCAGTTGAGGAGACAAGAGACGGCAACAAAGAGCTTGAACTTCATAGTGATTTGTGTTCAAGCCAGAATAACATTCACGGGGAAGAGTTATCTCACAATCCTGCAGCTGCAAGGTTGACAGAAAGATTTCATAGGCAAGATGAACAGTCGACCAAACAACGCTTATTGGTGGTGGCCAATAGGTTGCCTGTGTCTGCTACTAGAAATGGTGTGGATTCATGGCAACTTGAGATCAGCGTAGGGGGTCTAGTCAGTGCAATTTTAGGTATTGGAGCTTATCTTCAGCTTGATTTTCTTCTTGAAGGTGTAAAGGAGTTTGACACTAGGTGGATTGGGTGGGCTGGCCTGAATGTGCCAGATGAAGTTGGCCAGAACTCATTGACTGAAGCCTTAGCTGAAAAGAGATGCATCCCAGTATTTCTTGATGAGGAGATAGTTCATCAATATTACAACGGTTACTGCAACAACATCTTATGGCCTCTTTTTCATTACCTTGGACTTCCACAAGAGAACGAACTTGCTACCACTCGTACTTTTCAATCTCAATTTGATGCATATAAGATAGCAAACCAAATGTTTGCTGATGTGGTATATAAGCATTATAAGGAAGGTGATGTCGTTTGGTGCCATGATTACCACCTAATGTTTCTTCCAAAATGTTTAAAAGAACGTGATGAAAAAATGAAAGTTGGCTGGTTTCTCCACACGCCTTTTCCTACCTCAGAAATACATAGGACACTACCATCCAGAACAGAACTGTTGAGATCTGTACTTGCTGCTGACTTGGTGGGGTTTCATACATATGATTATGCAAGGCATTTTGTTAGTGCTTGTACTCGAATTCTTGGACTTGAGGGTACACCTGAAGGAGTAGAAGATCACGGGAAGCTGATCCGTGTAGCTGCATTTCCTATTGGGATCGACTCTGAACGATTTATCCGAGCCCTGGAACTCCCTCAAGTCCAGGATCACATGAAAGATTTTAAAAAACGATTTGGAGACCGGAAGATAATGCTGGGTGTGGACCGTCTTGATATGATAAAAGGAATACCCCAGAAAATCTTGGCATTTGAGAAGTTCCTTGAGGAGAATCCTGACTGGCGTGATAAAGTAGTCTTGATACAAATTGCTGTCCCTACAAGAACTGATGTTCCTGAATACAAAAAGCTTGCAAAGCGGGTGCATAAGATTGTTGGACGCATTAATGGAAGATTTGGAACACTTGGTTTTGTTCCAATGCATCACCTGGACCAATCACTTGACTTTCATACATTATGTGCATTGTACGCTGTTACTGATGTAGCACTCGTCACATCTTCAAGGGATGGAATGAACCTTGTCAGCTATGAGTATGTTGCTTGCCAAGCTTCTAAGAAGGGGGTTCTCATTCTAAGCGAGTTTGCAGGGGCAGCGCAGTCTCTTGGTGCTGGTGCTATCTTGGTAAATCCATGGAATATCACTGAGGTTGCTTCCTCTATTGCTTATGCCTTGAACATGCCTGCTGATGAAATAGAGAAACGCCATCAGCTCAACTTCAAGCATGTGACTACTCACACATCTCAGGAGTGGGCTGCAACATTCGTGAGTGAACTGAATGATACTACCGTTGAAGCTCAACTCAGGACGAGACAGGTTCCTCCCATGCTTCCTAAACAAACTGCGGTTGATTGTTATTTAAAATCCAAGAATCGACTAGTCATTCTGGGTTTCAATGCCACGTTAACTGAACCAGTGGATGCCCTTGGGAATGGTGGCCAAGTTAAAGAAATGGAGCTTAAATTGCACCCAAATGTGAAAGATCCTTTAAAGAAGTTATCTGATGATCCGAAAACAACAATAGTTGTTCTTAGTGGGAGTGATCGAGGCGTCCTCGATAAAAACTTCAGTGGATACAACATGTGGCTGGCAGCAGAAAATGGGATGTTTTTACGTCTTAGTACTACTGGTGAATGGATGACAACCATGCCTGAAAATATAAACATAGATTGGGTTGATAGTGTGAAGCAAGTTTTTGAGTACTTCACAGAGAGAACTCCTCGATCTCAATTTGATCTGCGTGAGAGTTCAATGGTATGGAATTACAAGTACGCAGATGTTGAGTTTGGAAGACTTCAAGCAAGAGATTTGTTGCAGCATCTTTGGACAGGCCCAATATCAAACGCATCTCTTGATGTTGTCCAAGGTGGTAGAACGGTTGAGGTTCGAGCGGTTGGCGTCTCGAAGGGAGCAGCAATCGATCGCATTCTGGCAGAGATAATACATCAAAAGGCCATGAAGACACCTATTGATTATGTTCTCTGTGTAGGACACTTTCTGCCAAAGGATGAAGATGTGTACGCATTTTTTGAGCCAGATCTTCCACCTGAATCCAGCTCTCATGTGCCAAAATTCTCAAGCAGCAAGAGTAGTAGTGCGTCTAAGGCAGCTCGACTGAAGAAGCAAAGATCTCTGTCAACTTTAGAAAAGAGAAAGATGGAACAAGCAATTGGGATTCCAGCAGGACGGCCAACACTATCACATCGTGATAGAGTATTATTGAAGGAGGGTTCTTCAGTGCTTGATCTCAAAAGCGATAATTACTTCTCTTGTACCGTGGCCCGAAAGACATCAAGCGCACGATATCTTCTCAAAACTTCAGATCATGTTGTCCAACTCTTGAAGGAGCTGGCGGATCAACTTGAAGAATGA 3036 0.4312 MHHAHIVVGLWSSAWPRAQFFKPFVLNSSMPFCYKLISLPQVAPSLRFSSPRRALRDSAVLDVREIILKDLHSAHNKAKQMSGNNYNCSPTPTTPTSRLERLLRERALRKSNKHSQPVEETRDGNKELELHSDLCSSQNNIHGEELSHNPAAARLTERFHRQDEQSTKQRLLVVANRLPVSATRNGVDSWQLEISVGGLVSAILGIGAYLQLDFLLEGVKEFDTRWIGWAGLNVPDEVGQNSLTEALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQENELATTRTFQSQFDAYKIANQMFADVVYKHYKEGDVVWCHDYHLMFLPKCLKERDEKMKVGWFLHTPFPTSEIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDHGKLIRVAAFPIGIDSERFIRALELPQVQDHMKDFKKRFGDRKIMLGVDRLDMIKGIPQKILAFEKFLEENPDWRDKVVLIQIAVPTRTDVPEYKKLAKRVHKIVGRINGRFGTLGFVPMHHLDQSLDFHTLCALYAVTDVALVTSSRDGMNLVSYEYVACQASKKGVLILSEFAGAAQSLGAGAILVNPWNITEVASSIAYALNMPADEIEKRHQLNFKHVTTHTSQEWAATFVSELNDTTVEAQLRTRQVPPMLPKQTAVDCYLKSKNRLVILGFNATLTEPVDALGNGGQVKEMELKLHPNVKDPLKKLSDDPKTTIVVLSGSDRGVLDKNFSGYNMWLAAENGMFLRLSTTGEWMTTMPENINIDWVDSVKQVFEYFTERTPRSQFDLRESSMVWNYKYADVEFGRLQARDLLQHLWTGPISNASLDVVQGGRTVEVRAVGVSKGAAIDRILAEIIHQKAMKTPIDYVLCVGHFLPKDEDVYAFFEPDLPPESSSHVPKFSSSKSSSASKAARLKKQRSLSTLEKRKMEQAIGIPAGRPTLSHRDRVLLKEGSSVLDLKSDNYFSCTVARKTSSARYLLKTSDHVVQLLKELADQLEE 1011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1585 1011 CDD HAD_TPP 681 901 - -
Lele16g1585 1011 Gene3D - 705 867 IPR023214 -
Lele16g1585 1011 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 169 650 - -
Lele16g1585 1011 Pfam Trehalose-phosphatase 705 927 IPR003337 GO:0003824|GO:0005992
Lele16g1585 1011 Gene3D Glycogen Phosphorylase B; 430 632 - -
Lele16g1585 1011 TIGRFAM trehalose_OtsA: alpha,alpha-trehalose-phosphate synthase (UDP-forming) 170 648 IPR012766 GO:0003825|GO:0005992
Lele16g1585 1011 MobiDBLite consensus disorder prediction 905 932 - -
Lele16g1585 1011 MobiDBLite consensus disorder prediction 908 929 - -
Lele16g1585 1011 Coils Coil 992 1011 - -
Lele16g1585 1011 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 773 853 - -
Lele16g1585 1011 Gene3D - 773 853 - -
Lele16g1585 1011 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 162 429 - -
Lele16g1585 1011 CDD GT20_TPS 170 648 IPR001830 GO:0003824|GO:0005992
Lele16g1585 1011 Gene3D Glycogen Phosphorylase B; 161 429 - -
Lele16g1585 1011 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1-like 430 632 - -
Lele16g1585 1011 MobiDBLite consensus disorder prediction 78 97 - -
Lele16g1585 1011 SUPERFAMILY HAD-like 681 869 IPR036412 -
Lele16g1585 1011 Pfam Glycosyltransferase family 20 170 648 IPR001830 GO:0003824|GO:0005992
Lele16g1585 1011 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 157 1007 IPR001830 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1585 Lele-ChrLele16 9210588 9217328 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1585 81 1007 Trehalose Biosynthesis Gene Families AT1G78580 68.711 0.0 1303