Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1567 ATGGCCGTGCCGTTGCTTTCAAAGAAGATCGTGAAGAAGCGGGTGAAGAAGTTCAAGAGGCCACAGAGCGACCGCAAGATCTCTGTGAAGGTGTTGGTTGTTATTCTGGTTTCAATTGGGAACTGTAGTGTTTTGACCGCTTCAATATTTTGTTATCAACTAATGGAATTTTCTTTTGAATGTCTGTTTTATAGTTACTTGAGGTTCCATGACAATAAGGAAAACTGGCGCCGGCCCAAGGGTATAGATTCCCGTGTCAGGAGAAAGTTCAAGGGATGCACTTTAATGCCAAATATTGGCTATGGATCAGACAAGAAAACTAGACACTATCTCCCAAATGGTTTCAAGAAATTTGTTGTGAACAATGTCAAAGAGCTTGAACTTCTCATGATGCACAACAGGACATACTGTGCTGAGATTGCTCACAATGTTTCCACAAGGAAGAGAAAGGAGATAGTCGAGAGAGCTGCCCAGCTTGATGTTGTTGTTACAAACAGGACAGCCAGACTACGCAGCCAGGAGGATGAGTAA 531 0.4294 MAVPLLSKKIVKKRVKKFKRPQSDRKISVKVLVVILVSIGNCSVLTASIFCYQLMEFSFECLFYSYLRFHDNKENWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPNGFKKFVVNNVKELELLMMHNRTYCAEIAHNVSTRKRKEIVERAAQLDVVVTNRTARLRSQEDE 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1567 176 CDD Ribosomal_L32_L32e 68 165 IPR001515 GO:0003735|GO:0005840|GO:0006412
Lele16g1567 176 SMART Ribosomal_L32e_2 58 165 IPR001515 GO:0003735|GO:0005840|GO:0006412
Lele16g1567 176 Pfam Ribosomal protein L32 68 165 IPR001515 GO:0003735|GO:0005840|GO:0006412
Lele16g1567 176 PANTHER 60S RIBOSOMAL PROTEIN L32 AND DNA-DIRECTED RNA POLYMERASE II, SUBUNIT N 1 176 IPR001515 GO:0003735|GO:0005840|GO:0006412
Lele16g1567 176 SUPERFAMILY Ribosomal protein L32e 64 174 IPR036351 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1567 Lele-ChrLele16 9099998 9102005 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1567 1 176 Cytoplasmic Ribosomal Protein Gene Family AT4G18100 65.909 3.06e-77 225