Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1564 ATGATACTTGCTTCTGATGAGAATGCCTGCTGCTCTGAATTGAATGCAACCATGGAAAGGTTGACAGGTTGGAAGAGAAATGAAGTTATAGGAAAACTGCTTCCAGGGGAAATCTTTGGGGGTCTATGTCAACTGAAAGGTCAGGATACATTGACCAACTTTATGATTTCATTGGAGGAATCAGTGGTCAAGATTCTGAGAAATCCTCTTGGATTTTTTAATAGGAAAGGAGAATTTGTGGAGATCATTTCCATTATTGAGAACGCAAATTTAGGAAGCATTGACGAGTGCAGCACCGTGAAGCTAAACGATGAAGAATTTCTTCTGGGAAATATATTAGATGCTATTGTAAGCCAAGTCATGATCATCTTGATAAGAGGGAAAAACTTGCTGCTGTTTCAAGAAATTCCTGATGATATCAAGTCACTTACCCTATATGGTGATTAA 447 0.3826 MILASDENACCSELNATMERLTGWKRNEVIGKLLPGEIFGGLCQLKGQDTLTNFMISLEESVVKILRNPLGFFNRKGEFVEIISIIENANLGSIDECSTVKLNDEEFLLGNILDAIVSQVMIILIRGKNLLLFQEIPDDIKSLTLYGD 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1564 148 SUPERFAMILY PYP-like sensor domain (PAS domain) 2 42 IPR035965 -
Lele16g1564 148 Pfam PAS fold 2 60 IPR013767 GO:0006355
Lele16g1564 148 ProSiteProfiles PAS repeat profile. 1 32 IPR000014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1564 Lele-ChrLele16 9080180 9081081 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1564 2 81 Histidine Kinase Gene Family AT4G18130 55.422 2.52e-26 101