Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1553 ATGTCTGATGAACCCAGCAAGGAGCTTTATTACCAGGATCTCTATTTAGGCCATAGTAATCAGCTGTCTACTGGTGGATCTGCCATGTTCTGTGAGAAGAGCTTCTCTAATTCCTTTAATATTCCCGGTGGCCCTTCTTCATCAGGCTTTGATGATCCTCCATACATGAGCTTCACCGAATGCCTGCAAGGAGGCCTCAACTACAATTCTCTTGCTACTTCCTTTGGCCTGTCTCCTTCCTCCTCGGAGGTTTTCTCTTCTGTTGAAGGCAATAATAATAATCAGAAGCCATCATCAGAAGCTCCTGGTGGCGGGAGTGAAACGCCGGTGACCCAGAATTCATCCATCTATAATTCATCCTCTTCTGAAGCCGAAGCCGAAGAAGAAGACTCAGGCAAGAGCAAGAAAGACAGTACTGATCAGGTCAAAGCAGAAGAAGAAGGATCTAACAAGAAAGGGCAAGTCTTGAACAAAGGCAGGAAGAAAGGAGAGAAGAAGCAGAAGGAGCCCAGATTTGCCTTCATGACCAAGAGCGAGGTCGATCACCTCGAAGATGGTTATAGATGGAGAAAATATGGACAGAAAGCCGTCAAGAATAGCCCTTATCCAAGAAGCTACTACAGGTGCACGACGCAGAAGTGCACAGTGAAGAAACGCGTGGAGAGGTCATTTCAGGACCCAACCACTGTGATAACAACGTATGAGGGTCAGCACAACCATCCGGTCCCCACTTCGCTGAGAGGGAATGCGGCCGCAATGTTCACACCTTCTTCTCTCCTCACGCCCCACACTCCGTCGTCCCTCGCCGCCGCCGCCCACCATGATTTCTTCCATCACTTTAACTTCAACACCACCACCGCTGCTGCTGCTTCAGCTGCTGCCTATTCCGGAGTTTATAATTATAACAATTACAGTAACATCATTAACGGTACTACCAATGCTTCAAATTCCCTTCTTCATCATCATCATCATCATCAGCTTCCTCCTCATGACTACGGCCTCCTCCAGGACATTCTCCCTTCCATATTCCTCAAACAAGATCATCCCTAG 1050 0.4781 MSDEPSKELYYQDLYLGHSNQLSTGGSAMFCEKSFSNSFNIPGGPSSSGFDDPPYMSFTECLQGGLNYNSLATSFGLSPSSSEVFSSVEGNNNNQKPSSEAPGGGSETPVTQNSSIYNSSSSEAEAEEEDSGKSKKDSTDQVKAEEEGSNKKGQVLNKGRKKGEKKQKEPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCTVKKRVERSFQDPTTVITTYEGQHNHPVPTSLRGNAAAMFTPSSLLTPHTPSSLAAAAHHDFFHHFNFNTTTAAAASAAAYSGVYNYNNYSNIINGTTNASNSLLHHHHHHQLPPHDYGLLQDILPSIFLKQDHP 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1553 349 Gene3D WRKY domain 160 244 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele16g1553 349 ProSiteProfiles WRKY domain profile. 178 243 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele16g1553 349 MobiDBLite consensus disorder prediction 126 154 - -
Lele16g1553 349 MobiDBLite consensus disorder prediction 79 122 - -
Lele16g1553 349 SMART WRKY_cls 183 242 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele16g1553 349 SUPERFAMILY WRKY DNA-binding domain 175 243 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele16g1553 349 FunFam WRKY transcription factor 57 169 243 - -
Lele16g1553 349 MobiDBLite consensus disorder prediction 79 173 - -
Lele16g1553 349 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 88 279 IPR044810 GO:0003700
Lele16g1553 349 Pfam WRKY DNA -binding domain 184 241 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1553 Lele-ChrLele16 8998948 9000356 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1553 45 347 WRKY Transcription Factor Family AT4G18170 51.803 5.38e-78 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele16g1553 WRKY 1.5e-25 CL0274