Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1548 ATGGCTCTCTCTTCCCCATCATTTGCCTGTCAGGCAGTGAAACTTGCTCCCTCCCCTCCTGAACTTGGCATTGTTTCGATTCACAATGAGCACAAATGTTACAAAGCCCGTTTCATCCGAAAGCCCATGGTATGGCCCAGACCTTTTCGGCCTGTAACGGGATCAAATTTAATCAAACTGTATGGTTCAAAGCCGGATATCAGATTTTTGGCATGGGCGGACTCGACTACTGAGCAACCCAAGCTTGATCCATGCAGAGATGCTGTCGAGAGATACCGTATTGCCGGTGGGCCTCTCGGTGAGGTGACCGACCCACTCTACCAAGGTGGAAGCTTTGACCCATTGGGTCTTGCAGGTGACCCAGATGCTTTTGCTGAGCTGAAGGCGAAAGAGATCAAGAACGGTAAATTGGCCATGTTCCCAATGTTTGGATTCTTTGTTCAAGCCACTGTGACTGGAAAGGGACCTTTGGAAAACCTTGCGGACCATCTTGCTGACCAAGTGAAAAACAATACCTAG 519 0.4913 MALSSPSFACQAVKLAPSPPELGIVSIHNEHKCYKARFIRKPMVWPRPFRPVTGSNLIKLYGSKPDIRFLAWADSTTEQPKLDPCRDAVERYRIAGGPLGEVTDPLYQGGSFDPLGLAGDPDAFAELKAKEIKNGKLAMFPMFGFFVQATVTGKGPLENLADHLADQVKNNT 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1548 172 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 88 171 IPR001344 GO:0009765|GO:0016020
Lele16g1548 172 SUPERFAMILY Chlorophyll a-b binding protein 88 171 - -
Lele16g1548 172 Pfam Chlorophyll A-B binding protein 101 149 IPR022796 -
Lele16g1548 172 Gene3D Chlorophyll a/b binding protein domain 69 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1548 Lele-ChrLele16 8971713 8973248 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1548 88 171 Chloroplast and Mitochondria Gene Families AT2G34430 81.176 6.13e-41 137