Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1547 ATGTCTCCAAAGATCAGTTTGAATATACTCATAATAGTCTTGTTCATTTCCATTTCAACTACACTTTCAAATATTAATGCCGAATCAAGCTCACTGCTGGAAGTTGAAATTGAAGCTTGGAAGCTTTCAAAAGCTCTATCACTCATGACCCAAATGGAGCATTGGCAGATTGGGTTGACACAACCCATCATTGCAACTGGCCTTCAGGTTCTTGACTTAACCTCAAATTCATTTTCTGGGTTCATTCCTCCTCAGCTCAGCTTTTACTCCCAACTTTCTCGATTGCTTCTTTTTGAAAACTCTCTCTCTGGTCCAATTCCAACTGAGCTAGGAAACTTGAAAAGTCTGCAGTATTTGGATTTGGGATGTAACAATTTGAATGGAAGCCTCCCAGAAAGCTTATTTAACTGCACCTCTTTGCTGGGTATTGCTTTTAATTCTAACAATCCGAATGGTGAAATCCCTTCAAATATTGGCAATTTGGTTAACGTTACACAAATTGCAGGATTTACTAATCAGTTTGTTGGATCTATTCCTCCTTCCATAGGTAAGTTAAGGGCTTTACAATCTCTAGATTTTAGTCAAAACCAGTTGTCAGGAGAGATACCTAGAGAGATTGGGAATCTAGGAAACGTAGAACTTCTTGTCCTATTTGAAAATTCCTTGGTTGGAAAAATCCCTCCTGAACTTGGTCAATTTTCTGGTCACATTCCTTTAGAGCTATCCAATCTCTGTCTTCTTCAGGGTCTCTTCTTGCAAGGGAATACATTAGAAGGAACAAGGCCTAGTCAATTAATTGAACTGAATCAACTAACCGAGCTTAATCTACATCAGAACAAGCTGGTTGGTCAAATCCCGAAGGCTTTCAACATGCTTAAGATGCTTTCTCACTTAGATCTCCATGGAAACAATTCCAAGAGAGCTGAGTCAGCTCAACCAGCACTTAATGTTGGATTTGTCACAGAACCACCTGACAGGGAAACAACAAAGAGATCTCATTCACTATCCAAGAAGAGCATATATGTTATTGCCTCACTTGGATCTGTTGAAGTCCTCCTAATTTTGGTGTTGGTGATTCTATTTCTCATTCAACGTGCCAGATCGCGTCGTTCTAACAAGCCTGAGAATCATGGAATACCAAACTACACATCAGCTTTGACAAATGAGAGATTTGACAGAAAGGACCTAGAAAAGTGTACTAAATCTGACAAACTTTTCAAGAGAGAAACAAGCATCTTGAGCCAACTAAGGCATAGGAATTTGGTGAAGGTACTGGGGTATGCTTGGGAGAGTGGAAAAATAAAGGCTCTAGTTTTAGAGTATATGGAGAATGGGAATTTGGATAGCATAATACATGAAGAAGAAGGGATGGATCAAAGTAGATGGCATTATGTGAAAGGCTCAATGTTTTCATTACTTGATTTTGGAACAGCTAGAATGCTTGGTCTCCATTTGCAAGATGCTGCTTCTGTGTCTTCATCAACAACAGCTTTCCAGGCACTGTTGGTTATATGGCTCAAGCTTGCGTATATGAGGAAAGTAACGACCAAAGTCGACGTGTTCAGCTTTGGTATAGTAGTAATGGAGTTTCTGACAAGGAGACCTACAGGGCTCGCAGAAGAGGATGGCTTGCCCATAAGTCTACGTGAAATAGTTCAGAAAGCACTTTCAAATGTTACAACAAAGAGCCATGTTCTTCATCAACTTCTGGATCCTTTGCTCTTTGATAAGGATCATCAATATGAAGATGTCTTAGGGGATCTCTTGAAACTATCATTGACTTGTAACCTCCCTGATCCTCAAGATCGTCATACTACGAATCAAGTGTTGTCTCTCTTGATCATGCTTAAGAAGTTATCATAG 1863 0.3967 MSPKISLNILIIVLFISISTTLSNINAESSSLLEVEIEAWKLSKALSLMTQMEHWQIGLTQPIIATGLQVLDLTSNSFSGFIPPQLSFYSQLSRLLLFENSLSGPIPTELGNLKSLQYLDLGCNNLNGSLPESLFNCTSLLGIAFNSNNPNGEIPSNIGNLVNVTQIAGFTNQFVGSIPPSIGKLRALQSLDFSQNQLSGEIPREIGNLGNVELLVLFENSLVGKIPPELGQFSGHIPLELSNLCLLQGLFLQGNTLEGTRPSQLIELNQLTELNLHQNKLVGQIPKAFNMLKMLSHLDLHGNNSKRAESAQPALNVGFVTEPPDRETTKRSHSLSKKSIYVIASLGSVEVLLILVLVILFLIQRARSRRSNKPENHGIPNYTSALTNERFDRKDLEKCTKSDKLFKRETSILSQLRHRNLVKVLGYAWESGKIKALVLEYMENGNLDSIIHEEEGMDQSRWHYVKGSMFSLLDFGTARMLGLHLQDAASVSSSTTAFQALLVIWLKLAYMRKVTTKVDVFSFGIVVMEFLTRRPTGLAEEDGLPISLREIVQKALSNVTTKSHVLHQLLDPLLFDKDHQYEDVLGDLLKLSLTCNLPDPQDRHTTNQVLSLLIMLKKLS 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1547 620 Pfam Protein tyrosine and serine/threonine kinase 401 456 IPR001245 GO:0004672|GO:0006468
Lele16g1547 620 Gene3D Transferase(Phosphotransferase) domain 1 468 618 - -
Lele16g1547 620 SMART LRR_typ_2 268 291 IPR003591 -
Lele16g1547 620 SMART LRR_typ_2 113 137 IPR003591 -
Lele16g1547 620 SMART LRR_typ_2 185 209 IPR003591 -
Lele16g1547 620 SUPERFAMILY L domain-like 64 304 - -
Lele16g1547 620 Pfam Leucine Rich Repeat 68 87 IPR001611 GO:0005515
Lele16g1547 620 Pfam Leucine Rich Repeat 188 209 IPR001611 GO:0005515
Lele16g1547 620 PANTHER RECEPTOR-LIKE PROTEIN 55 473 613 - -
Lele16g1547 620 MobiDBLite consensus disorder prediction 304 331 - -
Lele16g1547 620 SUPERFAMILY Protein kinase-like (PK-like) 399 616 IPR011009 -
Lele16g1547 620 Gene3D Ribonuclease Inhibitor 15 312 IPR032675 -
Lele16g1547 620 Pfam Leucine rich repeat 247 304 IPR001611 GO:0005515
Lele16g1547 620 Gene3D Transferase(Phosphotransferase) domain 1 388 467 - -
Lele16g1547 620 FunFam Leucine-rich repeat receptor protein kinase EMS1 130 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1547 Lele-ChrLele16 8967658 8971245 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1547 68 617 Receptor kinase-like Gene Family AT5G46330 33.134 5.80e-76 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Lele16g1547 PK_Tyr_Ser-Thr 1.5e-07 CL0016