Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1530 ATGCCCACTCGATGGTCCTTCGAGGATTTTAAATTGTTCTACGACGCCAAGTTTGGTAGGAATAGAATCTTGGAGAATGGCGAGACAGCCGATAATCCCGCCAGTAATGGAAATGGAATCCCAAAAGAACATCGGATACGACTATCTATGAGCAGTTTCAGAGCCAGACAGAAGTCTTTGCTTCCTCCTTTTGAATCTGCAGAAATGCGTACTTTAGCAGAGAGCTTAAGTAGATACTTTACTGGCCTATTATCACCTTGGAAAGGGATTCTTCTGTTTGGGCCACCGGGGACAGGTAAGTTAGTTAGGGTACTATTTGAGCTTGCTAGGCACCATGCACCCTCAACAATATTTCTTGATGAGATTGATGCAATCATTAGTCAACGTGGTGAATCACACAGTGAGCATGAAGCAAGTAAGCGGTTAAAAACTGAGCTACTTATACAGATAGATGGCTTGACACGGACTTATGAACTTGTTTTTGTTTTGGCGGCAACAAATATTCCCTGGGAACTTGATGCAGCCATGCTCGGACGGCTTGAGAAGCGATGGTTTTCCCTTAACCGTGATCAAAAGATCCTTGTGCCACTTCCTGAACCAGAAGCAAGAAAAGCAATGTTTGAGGAACTTCTTCCAGCACAGCCTGGTGAGGAGCATATGCCCCATGATTTACTGGTGGAGCAGACAGAAGGATGTTCAGGATCAGATATCCGGTTACTCTGCAAAGAGGCAGCAATACAGCCATTGAGACGCTTAATGTCACAACTTGAACAGAGAGAAGAGCTGGTGCCGGAAGAAGAGTTGCCTAAAGTAGGGCCTATCGGACCTGAAGATATAGAGATTGCTTTGAAGAATACTAGGCCATCTGCTCATCTCCATGCCCACAAATATGAGAAGTTCAATGCTGATTATGGAAGTCAAATACTGCAATGA 933 0.4448 MPTRWSFEDFKLFYDAKFGRNRILENGETADNPASNGNGIPKEHRIRLSMSSFRARQKSLLPPFESAEMRTLAESLSRYFTGLLSPWKGILLFGPPGTGKLVRVLFELARHHAPSTIFLDEIDAIISQRGESHSEHEASKRLKTELLIQIDGLTRTYELVFVLAATNIPWELDAAMLGRLEKRWFSLNRDQKILVPLPEPEARKAMFEELLPAQPGEEHMPHDLLVEQTEGCSGSDIRLLCKEAAIQPLRRLMSQLEQREELVPEEELPKVGPIGPEDIEIALKNTRPSAHLHAHKYEKFNADYGSQILQ 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1530 310 Gene3D - 78 100 IPR027417 -
Lele16g1530 310 Gene3D - 198 284 - -
Lele16g1530 310 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 69 293 IPR027417 -
Lele16g1530 310 PANTHER AAA DOMAIN-CONTAINING 69 100 - -
Lele16g1530 310 CDD AAA 84 183 - -
Lele16g1530 310 Pfam ATPase family associated with various cellular activities (AAA) 101 183 IPR003959 GO:0005524|GO:0016887
Lele16g1530 310 FunFam Katanin p60 ATPase-containing subunit A-like 2 198 286 - -
Lele16g1530 310 Pfam AAA+ lid domain 225 260 IPR041569 -
Lele16g1530 310 Gene3D - 101 292 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1530 Lele-ChrLele16 8853299 8859384 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1530 84 269 Calmodulin-binding Proteins AT3G56690 32.000 6.14e-17 79.7