Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1521 ATGAGGCGGAATTGCAACTTGGAGCTTCAACTTTTTCCATCCTTTGATACCCGTCGTCTCCATGAAACGTCGACGGAACAAGACAGTGAAAGCCCACAGGAAAATCTGCAGAAGCTCACCATTTTCTATGACGGGAAGATGTGTATTTGCGATGTCACAGAGTTTCAGGCTAGATCGATCTTGATGCTTGCAAATAGAGAAATGAAGGAAAGAGTAAGGATACCAAACGGGTCGGAGCCATCTTCACCAAACACAGCTCCGTTGTATAGCCCAAGTAGTGGTCTTTCTATGAAAAGATCTCTGCAAAATTTCCTCCAGAAGAGAAAGAATCGAATCCTTGAAGCTTCCCCGTACCATCACTAA 363 0.4435 MRRNCNLELQLFPSFDTRRLHETSTEQDSESPQENLQKLTIFYDGKMCICDVTEFQARSILMLANREMKERVRIPNGSEPSSPNTAPLYSPSSGLSMKRSLQNFLQKRKNRILEASPYHH 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1521 120 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 27 118 IPR040390 -
Lele16g1521 120 MobiDBLite consensus disorder prediction 77 95 - -
Lele16g1521 120 Pfam tify domain 36 65 IPR010399 -
Lele16g1521 120 SMART tify_2 32 66 IPR010399 -
Lele16g1521 120 Pfam Jas motif 98 118 IPR018467 -
Lele16g1521 120 ProSiteProfiles Tify domain profile. 32 66 IPR010399 -
Lele16g1521 120 MobiDBLite consensus disorder prediction 71 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1521 Lele-ChrLele16 8767234 8768478 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1521 1 119 Tify Gene Family AT1G30135 48.031 3.92e-30 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Lele16g1521 tify 4.7e-11 No_clan