Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1514 ATGGAGGAGGATGCGATTCAAGCACAAGCGGGTAAATTCGCTAGAGTTGGAAATGGCAGAAACGACTCCAACAAGATAGGTTCTAGAGGGGGCGAGCAATATCCGGACGGCGAAGAAAATGGAGAGCTGATGAGAAGAGGCAGAGTTGGCGACGTCAGCTCGAATCGGTTCCATGGCTGGCACCACCATTCTTCAAGAATCATTAGGGTTTCTCGAGCATCTGGAGGGAAAGACCGGCACAGCAAGGTCATGACTTCAAAGGGTTTAAGAGACAGAAGGGTTAGGCTCTCGGTAACCACGGCAATCCAGTTCTATGATCTTCAAGATCGGCTTGGCTATGACCAACCCAGTAAAGCAGTGGAGTGGCTAATCAAAGAAGCTTCTGACGCCATTTCTGAGCTTCCGTCTCTGAACAACACATTCCCTGATACCCCAAAGCAACCAAGTGATGAGAAAAGAGGGAGGGTCGGGTCAGAACAAGGGTTTGATACAGCTGATGCTGAGGTAGATGGTGAGGGTGATTATCATCAGACTCAAAGTCAGAACCTTTCTTTGTCTAAGTCTGCTTGTAGCAGCACTTCCGAGACGAGCAAAGGCTCCGGCTTGTCCCTCTCAAGGTCTGATATTCGAGTAAACCGTGTGAAGGCCCGGGAGAGGGCAAGAGAGAGAACAGCAAAAGAGAAGGAGAAAGAGAACACTGCACATCCCCACAATGTGAATAACCCCATTTCTCAAACTGCTTCTTTCACTGAGCTTCTCACCGGAGGGATTACTAGTACTGTTCCTTCCACCACGAGTCCCACCGTCGATGATCATCATGAGCCTAATTTGTTCAGCAAGGCAGCGAGACAGCAATGGTGTACAACACCCATGGACTACTTTAACTTAGGCCTTGTGGGGAATCCCTCTATTAGAGCTCATAATCATAATCAATCTTCAGGGTTCTCAGGACAGATCCAATTGGGGAACTCTTCCCTTCCCCTTCAGGCAGTGTCTGTTTCTCCATTCAATGTGGGGTGTGAAAATCACTCAGATCAGCTGCAGCATTTCTCATTCATGCCTGACCATAATCTCATACCCAGCGGAAGTAGCGATTACAACCTCAACTTCACCAGGGGGACCCTTCAGTCCAATTCACCGACCTGCTGCGCCAACCATGGAGAATCACCACCACCACCATCAGTTCTCGTCAACTGGATTTGA 1203 0.4896 MEEDAIQAQAGKFARVGNGRNDSNKIGSRGGEQYPDGEENGELMRRGRVGDVSSNRFHGWHHHSSRIIRVSRASGGKDRHSKVMTSKGLRDRRVRLSVTTAIQFYDLQDRLGYDQPSKAVEWLIKEASDAISELPSLNNTFPDTPKQPSDEKRGRVGSEQGFDTADAEVDGEGDYHQTQSQNLSLSKSACSSTSETSKGSGLSLSRSDIRVNRVKARERARERTAKEKEKENTAHPHNVNNPISQTASFTELLTGGITSTVPSTTSPTVDDHHEPNLFSKAARQQWCTTPMDYFNLGLVGNPSIRAHNHNQSSGFSGQIQLGNSSLPLQAVSVSPFNVGCENHSDQLQHFSFMPDHNLIPSGSSDYNLNFTRGTLQSNSPTCCANHGESPPPPSVLVNWI 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1514 400 MobiDBLite consensus disorder prediction 174 207 - -
Lele16g1514 400 MobiDBLite consensus disorder prediction 1 44 - -
Lele16g1514 400 MobiDBLite consensus disorder prediction 134 244 - -
Lele16g1514 400 Pfam TCP family transcription factor 75 230 IPR017887 -
Lele16g1514 400 ProSiteProfiles TCP domain profile. 76 134 IPR017887 -
Lele16g1514 400 ProSiteProfiles R domain profile. 210 228 IPR017888 -
Lele16g1514 400 MobiDBLite consensus disorder prediction 210 235 - -
Lele16g1514 400 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 50 341 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1514 Lele-ChrLele16 8723110 8724383 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1514 55 379 TCP Transcription Factor Family AT4G18390 44.382 2.31e-67 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lele16g1514 TCP 4.9e-43 No_clan