Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1508 ATGGAGTCTCCATTCTCCAGCACTTGTGTCTGGTTTCTAGGACATTACAATTGTATGGGGAAACTAAGAGAAGCTGTTCTTTGTTTCGTGGCACTACTTTGGTTATGGGTTTCTGCAGCAAATGCTGTTCTTTCTCCTAAAGGAGTGAACTTTGAAGTGCAAGCTTTAATGGGCATAAAAGCTTCTCTGCGGGATCCTCATGGTGTCTTAGATAATTGGGATGCGGATGCAGTTGATCCTTGTAGCTGGACTATGATCACCTGTTCGTCGGACAACTTGGTCATTGGCCTGGGTACTCCCAGTCAAAGTCTATCAGGTACTCTGTCTCCAAGCATAGGCAACCTAACGAACCTTCAGATTGTGTTGCTACAGAATAATAATATAACAGGTCCAATACCTTCAGAGCTGGGCAGGCTTTCAAATCTTCATACACTTGATCTCTCTAATAACTTGTTGAATGGGGAAATTCCCCCCTCTCTCGGTCACTTGAGAAGTCTCCAATACTTGAGGCTCAACAATAATAGTCTTTCTGGAGAATGTCCAGAGCCGCTGGCTAACATGACTCAGCTTGCTTTTCTTGACTTGTCCTATGACAACCTCAGTGGCCCTATGCCCAGAATTTTGGCCAAATCATTCAACATTGTCGGAAACTCTCTTGTCTGTGGTACGGGGAAAGAGACAAAATGCCATGGCATGACGACATTGATTCCCATGTCCATGAACTTGAACACTACGGAGGATGCTATACCATCAGGCAAAACAAAGTCACACAAGATGGCCATTGCTTTTGGCTTAAGTCTAGGATGCCTTTGCTTGATGGTTCTTGGTTTTGGGCTATTCCTATGGTGGAGGCACAAGCATAACCAGCAGGCATTTTTTGATGTCAAAGACCGGTATCATGAAGAAGTGTACCTTGGAAACCTGAAGAGGTTCCAATTCAGAGAACTCCAGATAGCTACACACAACTTCAGCAGCAAGAACATTCTGGGAAAGGGTGGCTTTGGAAATGTGTACAAAGGAGTGCTATCCGATGGAACTCTTGTAGCTGTCAAGAGGCTTAAAGATGGCAATGCCATAGGAGGAGAGATCCAATTTCAAACTGAAGTTGAAATGATTAGCTTGGCGGTGCATCGAAACCTCCTCAGACTCTACGGATTCTGTATGACACCAACCGAAAGGCTTCTGGTTTACCCTTACATGTCAAATGGCAGTGTTGCTTCCCGTCTCAAGGCTAAACCAGTGTTAGACTGGGGCACTAGGAAGCAAATTGCCTTGGGGGCAGCCAGGGGACTGTTATACCTTCATGAGCAGTGCGATCCAAAGATAATTCATAGGGATGTGAAAGCTGCAAACATATTGCTTGATGACTATTGTGAGGCAGTGGTTGGAGATTTTGGGTTGGCAAAGCTTTTGGATCACCAAGATTCACATGTCACAACTGCGGTGAGAGGCACTGTAGGGCATATTGCCCCCGAGTATCTCTCCACAGGGCAATCCTCTGAGAAAACTGATGTCTTTGGATTTGGCATTCTCCTTCTTGAACTGATCACAGGCCAGAGGGCTCTGGAATTTGGGAAGGCAGCAAACCAGAAAGTAGCCATGCTAGATTGGGTGAAGAATATTCATCAGGAGAAGAAGCTAGAACTGTTCGTAGACAAGGATCTGAAGAACAACTATGACAGGATTGAGCTGGAAGAAATGGTTCAAGTGGCTCTCTTGTGTACTCAATACCTTCCCGGTCACAGGCCCAAAATGTCTGAAGTAGTAAGGATGCTTGAAGGAGACGGATTGGCAGAAAGATGGGAAGCTTCTCAGAGAGCTGATATGAGCAAGTGCAAGGCTCCTGAACTGTCTTCGTCTGATCGATATTCTGATCTAACTGATGACTCTTCCATGCAAGTCCAGGCCATGGAACTTTCAGGCCCGAGGTGA 1932 0.456 MESPFSSTCVWFLGHYNCMGKLREAVLCFVALLWLWVSAANAVLSPKGVNFEVQALMGIKASLRDPHGVLDNWDADAVDPCSWTMITCSSDNLVIGLGTPSQSLSGTLSPSIGNLTNLQIVLLQNNNITGPIPSELGRLSNLHTLDLSNNLLNGEIPPSLGHLRSLQYLRLNNNSLSGECPEPLANMTQLAFLDLSYDNLSGPMPRILAKSFNIVGNSLVCGTGKETKCHGMTTLIPMSMNLNTTEDAIPSGKTKSHKMAIAFGLSLGCLCLMVLGFGLFLWWRHKHNQQAFFDVKDRYHEEVYLGNLKRFQFRELQIATHNFSSKNILGKGGFGNVYKGVLSDGTLVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKAKPVLDWGTRKQIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDYCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEFGKAANQKVAMLDWVKNIHQEKKLELFVDKDLKNNYDRIELEEMVQVALLCTQYLPGHRPKMSEVVRMLEGDGLAERWEASQRADMSKCKAPELSSSDRYSDLTDDSSMQVQAMELSGPR 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1508 643 ProSiteProfiles Protein kinase domain profile. 323 578 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele16g1508 643 Pfam Leucine rich repeat N-terminal domain 52 89 IPR013210 -
Lele16g1508 643 ProSiteProfiles Leucine-rich repeat profile. 141 163 IPR001611 GO:0005515
Lele16g1508 643 FunFam Putative LRR receptor-like serine/threonine-protein kinase 49 231 - -
Lele16g1508 643 Gene3D Ribonuclease Inhibitor 49 231 IPR032675 -
Lele16g1508 643 FunFam Somatic embryogenesis receptor-like kinase 1 400 612 - -
Lele16g1508 643 MobiDBLite consensus disorder prediction 605 643 - -
Lele16g1508 643 Gene3D Transferase(Phosphotransferase) domain 1 400 612 - -
Lele16g1508 643 Gene3D Phosphorylase Kinase; domain 1 292 399 - -
Lele16g1508 643 SUPERFAMILY Protein kinase-like (PK-like) 299 593 IPR011009 -
Lele16g1508 643 FunFam Somatic embryogenesis receptor kinase 1 292 399 - -
Lele16g1508 643 ProSitePatterns Protein kinases ATP-binding region signature. 329 351 IPR017441 GO:0005524
Lele16g1508 643 MobiDBLite consensus disorder prediction 620 637 - -
Lele16g1508 643 SMART serkin_6 323 578 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele16g1508 643 ProSitePatterns Serine/Threonine protein kinases active-site signature. 442 454 IPR008271 GO:0004672|GO:0006468
Lele16g1508 643 SUPERFAMILY L domain-like 52 214 - -
Lele16g1508 643 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 29 603 - -
Lele16g1508 643 Pfam Protein kinase domain 324 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele16g1508 643 Pfam Leucine rich repeat 116 176 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1508 Lele-ChrLele16 8677389 8680348 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1508 19 643 Receptor kinase-like Gene Family AT5G16000 78.165 0.0 1002
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Lele16g1508 Pkinase 1.2e-44 CL0016