Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1499 ATGCAAGCCAGAGAGGTTTCAGGACTGAATTATCAGTTTCAGGTCCGTTCAAGCCCACCATATCCATGCCCACCTCATTACAGCTCTATACAGAACAATATATCCACATTCCAGCTTCAAAGATTCACCAACCAGCTATGCAATTTCCAAAACCCTCCTCAAGTTCAGGACTTTAGCCCTCAATCATCGTGCCTGAGCAGCAATTCGACTTCTGATGAAGCAGATGAGCAACAGCAGAACCTCATCATCAACGAGAGGAAACACAGGAGGATGATATCCAACAGGGAATCTGCTCGCAGGTCACGCATGAGGAAGCAGAAACACCTGGACGAGCTGTGGTCGCAGGTAGTGTGGCTCAGGAATGAGAATCATCAGTTGATAGATAAGCTGAACCATGTGTCGGAGAGCCATGATCGAGTGGTTCAGGAGAATGTTCAGCTGAAAGAGGAAGCTTCGGAGCTTCGTCAGATGTTAAAGGACATGAGGCTCAACAGTCCCTGCCCTTCTTTGAGTCCTCTGGAAGATGTCCTCTGCAGCTCCCCGTACCTCGGATCTGATTCCTCTGACCAATCCTTAACCAACTCCATCGAACTCCTCGGCTAA 603 0.4859 MQAREVSGLNYQFQVRSSPPYPCPPHYSSIQNNISTFQLQRFTNQLCNFQNPPQVQDFSPQSSCLSSNSTSDEADEQQQNLIINERKHRRMISNRESARRSRMRKQKHLDELWSQVVWLRNENHQLIDKLNHVSESHDRVVQENVQLKEEASELRQMLKDMRLNSPCPSLSPLEDVLCSSPYLGSDSSDQSLTNSIELLG 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1499 200 FunFam BZIP transcription factor 84 135 - -
Lele16g1499 200 Pfam bZIP transcription factor 86 135 IPR004827 GO:0003700|GO:0006355
Lele16g1499 200 CDD bZIP_plant_GBF1 87 138 IPR045314 GO:0003700|GO:0006355
Lele16g1499 200 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 89 104 IPR004827 GO:0003700|GO:0006355
Lele16g1499 200 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 84 147 IPR004827 GO:0003700|GO:0006355
Lele16g1499 200 Gene3D - 84 138 - -
Lele16g1499 200 Coils Coil 137 164 - -
Lele16g1499 200 MobiDBLite consensus disorder prediction 57 78 - -
Lele16g1499 200 SUPERFAMILY Leucine zipper domain 86 136 IPR046347 GO:0003700|GO:0006355
Lele16g1499 200 SMART brlzneu 82 146 IPR004827 GO:0003700|GO:0006355
Lele16g1499 200 MobiDBLite consensus disorder prediction 57 81 - -
Lele16g1499 200 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 26 172 IPR044521 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1499 Lele-ChrLele16 8634910 8635512 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1499 47 166 bZIP Transcription Factor Family AT3G30530 69.291 6.27e-51 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele16g1499 bZIP_1 2.4e-13 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g0995 13 21094063 21094683 Lele16g1499 16 8634910 8635512 hybridization
Lele14g0892 14 19471296 19471898 Lele16g1499 16 8634910 8635512 hybridization