Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1486 ATGGAGGAAACCGTCGCTCCAATTTTTGAATGGAATAGCAGCATGCTGAAAACGCTGGAAAGGTACCAAAAGTGCAGCTATGGTGCAGTGGAAGTGAGCAAGCCTACCAAAGAGCTCGAGAATAGCTACCGTGAGTACTTGAAGCTGAAAGCCAGATTTGAATCTCTCCAAAGGACTCAGAGAAACCTTCTAGGGGAAGACTTGGGCCCACTGAATACCAAAGAACTGGAGCAGCTCGAGCGACAACTGGACTCATCTCTCAAGCAAGTGAGGTCCACAAAGACACAATTCATGCTGGACCAGCTATTTTATCTTCAAAATAAGGAGCAAGTGTTGGTAGAAGCAAACAGAGCTCTGACTATTAAGCTGGAAGAGATTAATGCAAGAAACCACTTCAGACAGTCATGGGATGCTGATGAACAAAGCATGCCATATGAGACACACAATGCTCACTCTCAGGGTTTCTTTCAGCCTCTGGAATGCAATCCCACCTTGCAGATAGGACCTGAATACAGTTACAATCCAGTAGTTTCAGATCAGATGGCTGCAACAAGTCAAGGCCAGCAAGTGAATGGCTTCATTCCAGGGTGGATGCTCTGA 600 0.46 MEETVAPIFEWNSSMLKTLERYQKCSYGAVEVSKPTKELENSYREYLKLKARFESLQRTQRNLLGEDLGPLNTKELEQLERQLDSSLKQVRSTKTQFMLDQLFYLQNKEQVLVEANRALTIKLEEINARNHFRQSWDADEQSMPYETHNAHSQGFFQPLECNPTLQIGPEYSYNPVVSDQMAATSQGQQVNGFIPGWML 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1486 199 Coils Coil 76 96 - -
Lele16g1486 199 Coils Coil 39 59 - -
Lele16g1486 199 Pfam K-box region 36 123 IPR002487 GO:0003700|GO:0005634|GO:0006355
Lele16g1486 199 ProSiteProfiles K-box domain profile. 39 129 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1486 Lele-ChrLele16 8531223 8535522 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1486 9 199 MADS-box Gene Family AT5G15800 63.592 3.80e-79 235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g1010 13 21199917 21206278 Lele16g1486 16 8531223 8535522 hybridization
Lele14g0906 14 19582253 19587795 Lele16g1486 16 8531223 8535522 hybridization