Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1483 ATGGCTATCTTCTTGATTGCAATTATCTCTGTGTTCTTGGTGCTCTGTTTTTGCTCTGCTCTCTTGAGGTGGAATGAAGTTCGTTTCAGCGAGAAGGGTTTGCCTCCTGGCACCATGGGTTGGCCTGTCTTTGGAGAAACCACTGAGTTTCTCAAGCAAGGTCCAAGCTTCATGAAAAACCAGAGAGCAAGGTATGGCAGTTTTTTCAAATCCCACATACTTGGGTGTCCTACCATGGTGTCTATGGATGCAGAACTGAACAGATACATCCTAATGAATGAATCAAAAGGGCTTGTTCCAGGATACCCGCAATCCATGTTAGATATCTTAGGCAAATGCAACATTGCAGCTGTTCATGGCTCCACTCACAAGCACATGAGAGGTGCTCTCTTATCCATCATTAGTCCCACCATTATCAGAGACGAGCTTTTGCCTAAAATCGACCACTTCATGAGAACCCACTTGACCAATTGGGATAACAAGATCATTAACATTCAAGGCAAAACCAAAGAGATGGCATTTCTGTTATCTTTGAAGCAAATTGCCGGCATTGAATCCAGCTCAATCTCTGGTCAATTCATGTCAGAGTTCTTCAAGCTAGTTTTAGGGACACTCTCTCTGCCTATTGACCTTCCTGGCTCCAATTATCGCCGTGGAATTCAGGCAAGGAAGAACATTGTGAGCATTCTGAATCAGCTGCTAGAGGAAAGAAGAGGTTCCCCAGAAACTCACCAAGACATGCTTGGATGCTTGATGAGAAAAGATGATTGTAGATACAAATTAACTGATGAAGAAATCATTGATCTGATCATTACCATTATATATTCTGGGTATGAAACTGTTTCAACCACTTCAATGATGGCCGTGAAGTACCTGCATGACCACCCAAAAGTTCTTGAAGAACTCAGAAAAGAGCATTTCGCCATAAGAGAGAGGAAAAAGCCAGATGATCCAATCGACTGTAACGATCTCAAATCAATGAAGTTTACTCGCGCGGTGATATTTGAGACCTCGAGATTGGCCACAATAGTGAACGGAGTATTAAGGAAAACGACCCAGGACATGGAACTAAATGGATATTTGATTCCCAAAGGATGGAGGATTTATGTGTATACCAGAGAGATCAACTACGACCAGTTTCTGTATCCTGACCCGCTCACGTTCAACCCATGGAGATGGCTGGAGGAGAAGAGCATAGAATCCCAGAACTATTTCTTGATATTTGGGGGAGGAACGAGGCAGTGTCCAGGGAAAGAGTTGGGGATAGCAGAAATCTCAACTTTCTTGCACTATTTTGTGACCAGATACAGGTGGGAAGAAGTAGGAGGAGATAAACTAATGAAATTTCCAAGAGTGGAAGCTCCAAATGGACTGCACATAAGGGTTTCATCCTACTGA 1398 0.4313 MAIFLIAIISVFLVLCFCSALLRWNEVRFSEKGLPPGTMGWPVFGETTEFLKQGPSFMKNQRARYGSFFKSHILGCPTMVSMDAELNRYILMNESKGLVPGYPQSMLDILGKCNIAAVHGSTHKHMRGALLSIISPTIIRDELLPKIDHFMRTHLTNWDNKIINIQGKTKEMAFLLSLKQIAGIESSSISGQFMSEFFKLVLGTLSLPIDLPGSNYRRGIQARKNIVSILNQLLEERRGSPETHQDMLGCLMRKDDCRYKLTDEEIIDLIITIIYSGYETVSTTSMMAVKYLHDHPKVLEELRKEHFAIRERKKPDDPIDCNDLKSMKFTRAVIFETSRLATIVNGVLRKTTQDMELNGYLIPKGWRIYVYTREINYDQFLYPDPLTFNPWRWLEEKSIESQNYFLIFGGGTRQCPGKELGIAEISTFLHYFVTRYRWEEVGGDKLMKFPRVEAPNGLHIRVSSY 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1483 465 PANTHER CYTOCHROME P450 26 32 443 - -
Lele16g1483 465 Pfam Cytochrome P450 35 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele16g1483 465 PRINTS P450 superfamily signature 332 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele16g1483 465 PRINTS P450 superfamily signature 276 293 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele16g1483 465 PRINTS P450 superfamily signature 406 415 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele16g1483 465 PRINTS P450 superfamily signature 415 426 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele16g1483 465 PRINTS E-class P450 group IV signature 360 374 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele16g1483 465 PRINTS E-class P450 group IV signature 376 394 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele16g1483 465 PRINTS E-class P450 group IV signature 415 433 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele16g1483 465 PRINTS E-class P450 group IV signature 399 415 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele16g1483 465 PRINTS E-class P450 group IV signature 327 343 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele16g1483 465 PRINTS E-class P450 group IV signature 56 79 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele16g1483 465 Gene3D Cytochrome P450 25 464 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele16g1483 465 FunFam Cytochrome P450 85A1 25 464 - -
Lele16g1483 465 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 408 417 IPR017972 GO:0005506|GO:0016705
Lele16g1483 465 SUPERFAMILY Cytochrome P450 33 447 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1483 Lele-ChrLele16 8494322 8497078 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1483 82 465 Cytochrome P450 AT5G38970 71.169 0.0 576
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g1014 13 21238833 21241549 Lele16g1483 16 8494322 8497078 hybridization
Lele14g0911 14 19625798 19628714 Lele16g1483 16 8494322 8497078 hybridization