Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1481 ATGAAGTGTTATGTTCACTCTAAATTTCCCGCCTATTCTGGTCCAATTCCATTGGCTGTTGCTTTAAGATATGGGAACTCAACACTTTCAAAACTACATAATACTATCATGAAACTCATCATCTCAGCTCTCTGTGTTCTGCTGTTTTCCTCTTTTTCAGCTGCTTATGATCCTCTGGATCCAAACGGCAACGTAACAATCAAATGGGATGTCATGTCTTGGACCCCAGATGGCTATGTTGCTGTGGTGACACTCCACAATTTCCAATTGTTCCGGCACATCATGAATCCTGGGTGGACAATGGGATGGACATGGGCTAAGAAAGAGGTGATATGGTCCATGGTAGGGGCACAAACCACAGAACAAGGAGACTGCTCAAAGTTTAAGGGCAATGTGCCTCATTGCTGCAAGAAAACTCCCACAGTTGTGGACTTGCTTCCCGGTGTGCCGTACAACCAGCAATTCTCAAACTGTTGTAAGGGTGGTGTTGTGGCTGCATGGGGCCAAGATCCTTCAGCATCTATCTCTTCCTTCCAAGTAAGTGTTGGACAAGCAGGTACTTCAAACAAAACAGTTAAACTCCCTAAGAATTTCACTCTCTTGGCTCCGGGGCCGGGCTATACTTGTGGCCCTGCCAAAATCGTGCCTTCCACCACTTTCCTTACGCCTGACAAACGCAGGAAGACTCAGGCGCTGATGACATGGAATGTAACCTGCACTTACTCACAATTTTTGGCAAGAAAGAACCCAAGTTGCTGTGTCTCGTTGTCATCCTTCTACAATGATACCATCACAGCCTGCCCCTCTTGTGCATGTGGCTGCCAGAACAAGAAGAACTGTGTAAAGAGTGACTCTAAAATTCTCAGCATGGTGGGATTACACACTCATAAGAAAGACGATGAACCACTGCTACAGTGCACTCATCACATGTGCCCAATCAGGGTACATTGGCATGTGAAGATCAATTATAAGGACTATTGGCGAGTAAAAATTGCCATAACAAATTTCAATTACAGGATGAACTACTCCCTTTGGACCCTTGCAATTCAGCATCCAAATCTTAACAACATCACCCAAGTTTTCAGTTTTAATTACAAGCCTCTGGTAGCCTACGAGTCCATAAATGATACCGGTATGTTCTACGGCATGAAGTACTACAATGATCTACTAATGGAGGCCGGACCGGCCGGCAATGTTCAGTCAGAGGTTCTTATGCAGAAGGGCAAGGATACTTTCACATTGAAGCAGGGTTGGGCATTTCCTCGCAAGGTCTATTTTAATGGTGATGAGTGCATGCTACCTCCCCCTGATAAATACCCATTTCTCCCCAATTCAGCTCCTGTAACTATACCCAACTTCCCAGTATTAATCTTATCATTGCTTTTCCTGCTACTTGTTTGCTGA 1404 0.448 MKCYVHSKFPAYSGPIPLAVALRYGNSTLSKLHNTIMKLIISALCVLLFSSFSAAYDPLDPNGNVTIKWDVMSWTPDGYVAVVTLHNFQLFRHIMNPGWTMGWTWAKKEVIWSMVGAQTTEQGDCSKFKGNVPHCCKKTPTVVDLLPGVPYNQQFSNCCKGGVVAAWGQDPSASISSFQVSVGQAGTSNKTVKLPKNFTLLAPGPGYTCGPAKIVPSTTFLTPDKRRKTQALMTWNVTCTYSQFLARKNPSCCVSLSSFYNDTITACPSCACGCQNKKNCVKSDSKILSMVGLHTHKKDDEPLLQCTHHMCPIRVHWHVKINYKDYWRVKIAITNFNYRMNYSLWTLAIQHPNLNNITQVFSFNYKPLVAYESINDTGMFYGMKYYNDLLMEAGPAGNVQSEVLMQKGKDTFTLKQGWAFPRKVYFNGDECMLPPPDKYPFLPNSAPVTIPNFPVLILSLLFLLLVC 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1481 467 Pfam COBRA-like protein 79 242 IPR006918 GO:0010215|GO:0016020
Lele16g1481 467 PIRSF COBRA 27 467 IPR006918 GO:0010215|GO:0016020
Lele16g1481 467 PANTHER PROTEIN COBRA 44 459 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1481 Lele-ChrLele16 8479922 8481991 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1481 55 466 COBRA Gene Family AT3G29810 66.827 0.0 615
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g1016 13 21256706 21259978 Lele16g1481 16 8479922 8481991 hybridization
Lele14g0914 14 19642905 19646231 Lele16g1481 16 8479922 8481991 hybridization