Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1480 ATGGGTTTCTGTTTGATACCCGAAATTAGATCCCTCTGGAAAGCAAGCTCCGGCATTCTATTTTTGTCCCTACTCACTTGCTTTTGCTTCCCTTCTACAGAAGCTTATGATCCACTTGACCCGAATGGAAATATCACAATCAAATGGGATATCATCAGCTGGACCCCTGATGGTTATGTTGCTGTAGTTACTATGAACAACTTCCAACAATATCGTCACATTGCAGCACCAGGGTGGACATTAGGATGGACATGGGCAAAGAAGGAGGTGATATGGACCATGATGGGAGCACAGGCCACTGAACAAGGGGATTGTTCAAAATTTAAGGGAAATGTCCCACATTGCTGTAAAAAGAACCCGACAGTTGTAGATTTACTTCCAGGAACGCCTTACAATCAGCAAATTGCAAATTGCTGCAAAGGTGGGGTACTCACCTCATGGGCACAGGATCCACCCAATGCGGTTGCTTCATTTCAGGTAAGTGTTGGCAGAGCTGGAACCACTAACAAAACAGTCAAGGTGCCCAAAAACTTCACCCTGAATGCACCAGGACCAGGTTATACTTGTGGGCCAGGAAAAATTGTGCCACCCACTAAATTCATACAAGCAGACAAAAGGAGAGTAACACAAGCACTCATGACATGGAACGTAACATGTACGTATTCACAATTTCTAGCTCAGAAAACTCCTACTTGCTGCGTCTCCCTCTCTTCTTTCTATAATGATACTATTGTACCCTGCCCAACGTGTTCATGTGGCTGTCGGGGCAATTCATCTGCCTGTGTAGGGCCAGGTTCACCCCGTCTGGAATCAGTTGTTTCTGGAAAAAATGGTTTGTCACCTTTGGTTCAATGTACTAATCATATGTGCCCAATTCGAGTCCATTGGCATGTTAAGGTTAACTACAAGGAGTACTGGCGTGTTAAGATCACCATTACCAATTTTAATCACAGGATGAATTATTCGGAGTGGAACTTGGTTGTTCAACACCCAAACCTTGACAATCTGACCCAACTTTTCAGTTTCAACTACAAGGGATTAACACCATACGGAGTAATAAATGATACAGCAATGCTTTGGGGAATTAAGTTCTACAATGATTTTCTAAACGTAGCTGGCCCCTCTGGTAATGTACAGTCAGAGCTACTTTTCCGAAAGGATAAATCGACTTTCACTTTCGAGAAGGGCTGGGCTTTTCCTCGAAGGATCTATTTTAATGGTGACAATTGTGTGATGCCACCACCAGATGCATATCCTTGGTTGCCTAATGCCAGTTCCCGGCAAGAAGTTTCCCTGCTCACCTTAGTGATATCTTGTTTGGTATCCTTGGTCTTTTACATGTTTGCTTGA 1350 0.4363 MGFCLIPEIRSLWKASSGILFLSLLTCFCFPSTEAYDPLDPNGNITIKWDIISWTPDGYVAVVTMNNFQQYRHIAAPGWTLGWTWAKKEVIWTMMGAQATEQGDCSKFKGNVPHCCKKNPTVVDLLPGTPYNQQIANCCKGGVLTSWAQDPPNAVASFQVSVGRAGTTNKTVKVPKNFTLNAPGPGYTCGPGKIVPPTKFIQADKRRVTQALMTWNVTCTYSQFLAQKTPTCCVSLSSFYNDTIVPCPTCSCGCRGNSSACVGPGSPRLESVVSGKNGLSPLVQCTNHMCPIRVHWHVKVNYKEYWRVKITITNFNHRMNYSEWNLVVQHPNLDNLTQLFSFNYKGLTPYGVINDTAMLWGIKFYNDFLNVAGPSGNVQSELLFRKDKSTFTFEKGWAFPRRIYFNGDNCVMPPPDAYPWLPNASSRQEVSLLTLVISCLVSLVFYMFA 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1480 449 Pfam COBRA-like protein 59 222 IPR006918 GO:0010215|GO:0016020
Lele16g1480 449 PIRSF COBRA 10 449 IPR006918 GO:0010215|GO:0016020
Lele16g1480 449 PANTHER PROTEIN COBRA 25 439 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1480 Lele-ChrLele16 8475948 8479276 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1480 1 446 COBRA Gene Family AT3G02210 72.284 0.0 681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g1017 13 21262160 21263727 Lele16g1480 16 8475948 8479276 hybridization
Lele14g0915 14 19648624 19655479 Lele16g1480 16 8475948 8479276 hybridization